Phodopus roborovskii (desert hamster): 127226401
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Entry
127226401 CDS
T08852
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127226401 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127226401 (Bard1)
04121 Ubiquitin system [BR:
prob04121
]
127226401 (Bard1)
03036 Chromosome and associated proteins [BR:
prob03036
]
127226401 (Bard1)
03400 DNA repair and recombination proteins [BR:
prob03400
]
127226401 (Bard1)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
127226401 (Bard1)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
127226401 (Bard1)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127226401 (Bard1)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
127226401 (Bard1)
BRITE hierarchy
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
127226401
NCBI-ProteinID:
XP_051046361
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MPRRPPAVRSGNKPCPAPAMEPADGGPWAHSRAALARLERLLRCSRCTNILKEPVCLGGC
EHIFCSVCISDCVGSGCPVCYTPAWILDLKINRQLDSMIQLYRKLQNLLHDNKLSDPKDN
TSRTGSFGDAQSKKNSIKMWFSPRSKKVRYVVNKASVPTQPESAKDDKAQEASTYEFIST
SPPEVVSKRNKTASRTSAKKQRKKSSAEINQEGKSRPETEDRFDSTEGLKEERLVSCNQT
LFMESPQVNGEIDLLASGSVIESECSGRLTEVSLPLAEHIVSPGTVSNSEETPEKKACDK
DLCSVGCNGNHKDCSRSPNPTSKKCESNIGSLSRDVIKPRVLAENICSSLPSEKLQVDVI
LISDNSLSLSPGTPPPLLNNSTHRQMMSKPSTVKLSPGNAARKRNHRGETLLHIASIKGD
ISSVEYLLQNGNDPNVKDHAGWTPLHEACSHGHLKVVELLLQHNALVNTTGYQNDTPLHD
AAKNGHVDIVRVLLSYGASRNAVNIFGVRPVDYTDNENIRSLLLLPEKNESSSTSKCSVV
TAEQRRNGPLVLIGSGLSSQQQKMLSKLETVLKAKRCAEFDSTVTHVIVPDDEAQSTLKC
MLGILNGCWILKFDWVKACLRSKVREQEEKYEVPGGPQKSRLNREQLLPKLFDGCYFFLG
GTFKHHPKDDLLKLIAAAGGKVLNRKPKPDSDVTQTINTVAYHANPDSDQRFCTQYIVYE
DLFNCRPERVRQGKVWMAPSTWLISCVMAFELLPLDS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaggccgcccgcggtccgctccgggaacaagccttgtcccgcgcccgccatg
gagccggccgacggcgggccctgggcccacagccgcgcggcgctcgcccgcctggagagg
ctgctgcgctgctcccgctgcactaatattctgaaggagccagtatgcttaggaggctgt
gagcacatcttctgtagtgtttgtataagtgactgtgttggatcaggatgtccagtgtgt
tacacaccggcctggatcctagacctcaagataaacagacaattggacagcatgatccag
ctttataggaaacttcagaatttgctacatgacaataaactttcagacccaaaagacaac
acatctaggacaggttcatttggtgatgcacaaagcaagaagaattcaataaaaatgtgg
tttagtcctcgaagtaagaaggttagatatgttgtgaataaagcctcagtaccaacccag
cctgaaagcgcaaaggatgacaaagcccaggaagcctccacatatgaatttatttccaca
agcccccctgaagttgtttctaagaggaataagacagcttctagaacatctgcaaaaaag
cagcggaagaaatcctcagctgagatcaaccaggaggggaagtcaaggccagaaacagaa
gataggtttgattccacagagggactgaaggaggagaggctagtctcctgtaaccaaaca
ctatttatggaaagtccacaggtaaatggtgaaatagacttactagctagtggttctgtc
atagaatctgaatgttctggaagattgactgaagtctctttaccactggctgagcatata
gtgtctccaggcactgtgagtaatagtgaagagactcctgagaagaaggcctgtgataaa
gatctttgttcagtaggatgtaatggaaatcacaaagattgtagcaggtctcccaatcct
acttctaagaaatgtgagagcaacattgggagccttagcagagatgtcattaaaccaaga
gtgcttgcagaaaatatatgttcttcactgccttcagagaaacttcaagttgatgtcata
ctcatatcagataactcccttagcctttcaccaggcacacccccacctctgctgaataat
tcaactcacagacaaatgatgtcaaagccctccacagtgaagctgtcacccggtaatgcg
gccaggaaaagaaatcacagaggagagactctgcttcatattgcttctattaagggtgat
atatcttctgttgaatacctcttgcaaaatggaaacgaccccaatgttaaagaccatgct
ggatggacaccgttgcatgaagcctgcagtcatgggcacctaaaggtagtggaattgctg
ctccagcataatgctttggtgaacaccacaggctatcagaatgatacaccactgcatgat
gcggccaagaacggccatgtggacatcgtcagggtgttactgtcctatggcgcctccagg
aatgctgttaacatatttggtgtacggcctgtggattatacagacaatgaaaatataaga
tcattattgctgctaccggagaagaatgaatcatcctcaactagcaagtgctcagtcgtg
actgctgaacagcgaaggaatgggccactggttcttataggcagtgggctttcttcccaa
cagcagaaaatgctcagcaaacttgagacagttctcaaggctaaaagatgtgctgagttt
gatagtacagtaactcatgtcattgttcctgatgatgaagctcaaagtactctgaagtgt
atgctcggaattctcaatgggtgttggatcctgaagtttgactgggtgaaagcttgtttg
cgcagcaaagtccgtgaacaggaagaaaagtacgaagttcctggaggtccgcagaagagc
aggctcaacagagagcagctgttgccaaagctgtttgatggatgctacttctttttgggg
ggaacctttaaacatcatccaaaagatgacctcctcaagctcattgctgcagcaggaggc
aaggtgctcaatagaaagcccaagccagacagtgatgtgactcagaccatcaacactgtt
gcataccatgccaaccctgactctgatcagcgtttctgtacacagtacatcgtctatgaa
gatctgtttaattgtcgcccggaaagggtccggcagggcaaagtctggatggctccttcc
acctggcttatcagctgtgtaatggcctttgaattgcttcctcttgacagctga
DBGET
integrated database retrieval system
