Phodopus roborovskii (desert hamster): 127231673
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Entry
127231673 CDS
T08852
Symbol
Usp28
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 28 isoform X1
KO
K21122
ubiquitin carboxyl-terminal hydrolase 28 [EC:
3.4.19.12
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127231673 (Usp28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127231673 (Usp28)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127231673 (Usp28)
Peptidases and inhibitors [BR:
prob01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127231673 (Usp28)
Ubiquitin system [BR:
prob04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127231673 (Usp28)
BRITE hierarchy
Motif
Pfam:
UCH
UIM
UBA_4
Motif
Other DBs
NCBI-GeneID:
127231673
NCBI-ProteinID:
XP_051053327
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MTAELQQDDAAGATDGHGSSCQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTD
QRVKEPSYDTTATEPSEDEGSATNKELLAKVIDLTHDNKDDLQAAIALSLLESPKIQTDV
RDLNRMHEANSAETKRSKRKRCEVWGENHNPNNWRRVDGWPVGLKNVGNTCWFSAVIQSL
FQLPEFRRLVLSYSLPQNILENCRSHTEKRNIMFMQELQYLFALLLGSNRKFVDPSAALD
LLKGAFRSSEEQQQDVSEFTHKLLDWLEDAFQLAVNVNSSPRSKSENPMVQLFYGTFLTE
GVREGKSFCNNETFGQYPLQVNGYRNLDECLEGAMVEGDIALLPSDHSVKYGQERWFTKL
PPVLTFELSRFEFNQSLGQPEKIHNKLEFPQIIYMDRYMYKSKELIRSKRESVRKLKEEI
QVLQQKLERYVKYGSGPARFPLPDMLKYVIEFASTKPASEGCLSQSAGHVTLPLPSVHCP
VSDLTSKQSSSPESCCQDAEGTFSSPEDALPKSDVMNGPFSSPHSSLGMSAPPAPRTVTD
EEMNSVKTCLQRWRSEIEQDIQDLKNCIENTTQAIEQMYCDPLLHQVPYRLHAVLVHEGQ
ANAGHYWAYIYNQPRQIWLKYNDISVTESSWEELERDSYGGLRNVSAYCLMYINDKLPHF
SAEAAPSESDEMAGEVEALSVELRQYIQEDNWRFEQEVEEWEEEQSCKIPQMESSPNASS
QDFSTSQESPAASSLGVRCLSSEHAVIAKEQTAQAIANTAHAYEKSGVEAALSELKEAEP
EKPKSQETILAEQSEQTPEASDTEAATPPNPEVSEVEIPSVGRILVRSDADGYDEEVMLS
PAMQGVILAIAKARQTFDRDGSEAGLIKAFHEEYSRLYQLAKETPTSHSDPRLQHVLVYF
FQNEAPKRVVERTLLEQFADRNLSYDERSISIMKVAQAKLMEIGPDDMNMEEYKRWHEDY
SLFRKVSVYLLTGLELFQKGKYQEALSYLVYAYQSNAALLMKGPRRGVKESVIALYRRKC
LLELNAKAASLFETNDDHSVTEGINVMNELIIPCIHLIINNDISKDDLDAIEVMRNHWCS
YLGKDIAENLQLCLGEFLPRLLDPSAEIIVLKEPPTIRPNSPYDLCSRFAAVMESIQGVS
TVTVK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgagctgcagcaggacgacgcggcaggggcgacggatggccatggctcgagt
tgccagatgctgttaaatcagcttcgcgaaatcacaggcatccaggatccttcctttctt
catgaagcattaaaggccagtaatggtgatatcacccaggctgtcagccttctcactgac
caaagagttaaggagcccagttatgacacaactgccacagaaccatctgaagatgaaggg
agtgctaccaacaaagaactattagcaaaagtgatagaccttacacatgacaacaaagat
gaccttcaggcagccattgccttgagtctactggagtctcctaagattcaaactgatgtc
agagatcttaatagaatgcatgaagcaaactctgcagaaactaaacggtcaaagcgaaaa
cgctgtgaagtttggggagaaaaccacaatcccaataactggaggagagtggatggttgg
ccagttgggctgaaaaatgttggcaacacgtgttggttcagtgctgttatccagtctctc
tttcagttgcctgaattccgaagacttgttctgagctatagtctaccacagaacatactt
gaaaactgtcgaagtcacactgaaaagagaaatatcatgtttatgcaagagcttcagtat
ttgtttgctctgttgttgggatcaaaccgaaagtttgtagatccttctgcagctctggat
ctactgaaaggagccttccggtcatcagaggaacagcagcaagatgtgagtgaattcaca
cacaagctcctggattggctggaggatgcgttccagctagctgttaatgttaatagcagt
cccaggagtaaatctgaaaatcccatggtgcagctgttctatggtactttcctgaccgaa
ggggttcgagaaggaaagtccttttgtaacaacgagaccttcggccagtatcctctccag
gtaaatggttatcgaaacttagacgaatgtttggaaggggccatggtggaaggtgacatt
gcgctgcttccttccgatcattcagtgaagtatggacaagagcgttggtttaccaaacta
cctccagtgttgaccttcgaactctccagatttgagtttaatcaatctcttgggcagcca
gaaaaaattcataataagctggaatttcctcagattatttatatggataggtacatgtat
aagagcaaagagcttattcgaagtaagagagagagtgttcgaaagttgaaagaggaaata
caggttctgcagcaaaaattggaaaggtatgtgaagtacggctctggcccagctcggttc
ccactcccggacatgttgaaatacgtcattgaatttgccagtacaaagcctgcctctgaa
ggctgtctttctcaaagtgctgggcacgtgacattgccacttccttcagtgcactgccct
gtttctgacctcacatccaagcaaagttcaagtccagaaagctgttgtcaggatgctgaa
ggcaccttttcctctcctgaggatgctctgcccaagtctgatgtaatgaatgggccgttt
tcctctccccactcctccctgggaatgtctgcacccccagctcctcggacagtcacagat
gaggagatgaactctgttaagacctgtcttcagaggtggcggagtgagattgaacaggat
atacaagatttaaagaattgtatcgaaaacaccacccaggctattgagcagatgtactgt
gatcctcttcttcatcaggtgccttatcgtttacatgcagttcttgttcatgaaggacaa
gccaacgctggacactactgggcttacatctataaccaaccacggcagatctggctcaaa
tacaatgatatctctgtcactgagtcttcctgggaggaacttgaaagagattcttatggg
ggcctgagaaatgtcagtgcctactgcttgatgtatatcaatgacaaactaccccacttc
agtgcagaagcagctcctagcgaatctgatgagatggcaggagaagtggaagcactctct
gtggaactcaggcagtacatccaggaagataattggaggtttgagcaggaggtagaggaa
tgggaagaagaacagtcctgtaagatcccacagatggagtcctccccaaacgcctcatca
caggatttctccacgtctcaagagtctccagcagcctcctctcttggtgttcggtgcttg
tcctctgaacatgctgtgattgcaaaggagcagactgcccaagctattgcaaacacggcc
catgcctatgagaagagtggggtggaagcagccttgagtgagcttaaggaagctgaacct
gagaagcccaaatcccaggaaacaatcctggcagaacagtcagagcagaccccagaggcc
agtgacacagaggctgctaccccacctaaccctgaggtctctgaagtcgagattcccagt
gtgggaaggattctggttagatctgatgcagatggatatgatgaggaggtgatgctgagc
cctgccatgcaaggggtcatcctggccatagctaaagcacgccagacctttgaccgagac
gggtctgaagcagggcttattaaggcattccatgaagagtactccaggctctatcagctt
gccaaagagacccccacctctcacagtgaccctcgccttcagcacgtccttgtctacttc
ttccaaaatgaagcacccaaaagggtggtagaacggacccttctggaacagtttgccgat
agaaaccttagctatgatgagagatctatcagtatcatgaaggtggctcaggccaagctg
atggaaattggtccagatgatatgaacatggaagagtataagaggtggcatgaagattac
agtttgttccgaaaggtgtctgtgtacctcctgacaggcctggaactctttcaaaaagga
aagtaccaggaagcactgtcctatctggtgtatgcctaccagagcaatgctgccttactg
atgaaggggccccgcaggggtgtgaaggagtctgtgatcgcactataccgcagaaaatgc
cttctggagctgaatgccaaggctgcctctctgtttgaaacgaatgatgaccactctgta
acagagggcattaatgtgatgaatgaattgatcattccctgtatccacctgatcattaat
aatgacatctctaaggatgacttggatgccattgaggtcatgaggaaccattggtgctct
tacctggggaaggacatcgcagaaaatctgcagctgtgtttaggggagttcctacccagg
cttctagatccttctgcagaaatcatcgtcttgaaagagcctccaactattcgaccgaat
tctccctatgacctttgcagccggtttgcagctgtcatggagtccattcaaggagtttca
acagtaacagtgaaataa
DBGET
integrated database retrieval system
