Phodopus roborovskii (desert hamster): 127236027
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Entry
127236027 CDS
T08852
Symbol
Nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127236027 (Nup210)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127236027 (Nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127236027 (Nup210)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127236027 (Nup210)
BRITE hierarchy
Motif
Pfam:
Big_2
Motif
Other DBs
NCBI-GeneID:
127236027
NCBI-ProteinID:
XP_051059394
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MARASRVQPALWVLLLLQAVGSAVAAKLNIPKVLLPFTRATRVNFTLEASEGCYRWSSTR
PEVASIEPLGSNEQQCSQKAVVQARLTQPARLTSIIFAEDITTGQVLRCDAIVDLIHGIQ
IVSTTRELYLEDSPLELKIQALDSEGNTFSTLAGLVFDWTIVKDTEANGFSDSHNALRIL
TFLESTYIPPSYISEMEKAAKQGDTILVSGMKTGSSKLKARIQEAVYKNVHPAEVRLLIL
ENILLNPAYDVYLLVGTSIRYKVQKIRQGKITELSMPSDQYELQLQNSIPDPQGDPTRPV
AVLTQDTSRVTAMQMGQTNLVLGHRSIRMQGASRLPNSTIYVVEAGYLGFTVHPGDRWVL
ETGHLYGITIEVFDKSSNKVYPSDNIRIEAVLPAEFFEVLWSSQNGSYHHVRAIQSGQTT
ISASLTSVVDQDGGVHVLQVPVWNQQEVDIHIPITLYPSILTFPWQPKAGAYQYTIKAHG
GSGNFSWSSSNYMVATVTVKGVMTTGSDTGLSVIQAHDVQNPLHFGEMKVYVIEPSSMEF
APCQVEARVGHTLELPLTISGFMPGVASEMVTLSDCSHFDLVVEVENQGVFQPLPGRLLP
GPDHCSGVKVRADAQGSTTLLVSYTHGHVHLGAKITLAAYLPLKAVDPSSVAVVTLGSSK
EILFEGGPRPWVLEPSKFFRNVTSEDTGSISLALLGPPASRNYQQHWVLVTCQALGEQVI
ALSVGNRPSLSNPFPAVEPTVVKFICALPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVS
SHRNPLLDLGAYDQQGRRFDNFSSLSIQWESSRPLLASTEPDQPMQLVSQDDGKGQKKLH
GLQTVSVHEASGTTVISAMATGYQQSHLSAARVKTPHDPLAPVSAAIELILVEDVRVSPE
EVTIYNHPSVQVELHITEGSGYFFLNSSTPDVIKVAYQDTRGVAVVHPLFPGSSTVMVHD
LCLAFPAPAKAIIHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLK
LRAASQIITLVILDEALDDYTATFLVHGIAIGQTSLSASVTDKSGQRVSSTPQQIEVFPP
FRLIPRKVTLIIGAMMQITSEGGPQPQSNILFSINSESVAAVSPAGLVRGLMVGNGSVLG
VVQAVDAETGKVIIVSQDHVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFS
FGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLPPQYNFAMNVYGRVKGRTGLRLVVKAM
DPTAGQLHGLGKELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSLIKLQTNRDGAAILSY
RVLNGPEKVPLVHIDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTVIVSVKVSPVSYLRIS
MSPVLHTQHKEALAALPLGMTMTFTVHFHDNSGDIFHAHNSVLNFATNRDDFVQIGKGAT
NNTCIVRTVSVGLTLLRVWDVEHLGLSDFVPLPVLQAITPEVSGAVVVGDILCLASVLIS
LGGISGTWSSSASNILYIDPKTGVAVARDAGSVTVYYEITGHLKTFKEIVVGTPQKIVAH
RLHSAQTSIQEATVSKVTISVGDRSSNLLGECSPAQREVIEALHPESLISCQLQFKQDVF
DFPALDIFTVEPGFDSALGQYLCSVTMHRLTDKQLKHLSMKKTSLAVTASIPSSHTSVEN
VGAEVPFSPGLYANQAEILLSNHYTSSEIKVFGTVEILENLEVKSGSPAVLAFVKEKSFG
LPSFITYTVGVSDPTAGSQGPLSTALTFSSSSTHQAITIPVTVAFVMDRRGPGPYGASIL
SHFLDSYQVMFFTFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLASSP
ATFNTLPPGRKTSPPSGLWSPAYASH
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggcctcgcgggtgcagccggcgctctgggtgctgctgttgctgcaggcagtg
ggctccgctgtggctgccaagctcaacattcccaaagtgctgctgcccttcacgcgggcc
acgcgcgtgaacttcactctggaagcttctgagggctgctaccgctggtcatctacccgg
ccagaggtagccagcatagaaccactgggttccaatgaacagcagtgctcccagaaggca
gtggtgcaggcccgcctgacccagccagcccgcctgaccagcattatcttcgcagaggac
atcaccacaggccaggtgctgcgctgtgacgccatcgttgacctcatccatggcattcag
attgtctctactacccgtgagctctatcttgaagactctcccctggagctgaagatccag
gctctggactcagaagggaataccttcagcaccctggcagggctggtctttgactggaca
attgtgaaggatacagaggccaatggtttctcagactcccacaatgcactacgcatcctc
accttcttggaatccacatatattccaccttcctacatctcagagatggagaaggcagcc
aagcagggggacaccatcctagtgtctgggatgaagactggaagctccaagctcaaggct
cgcattcaggaagcagtctacaagaacgttcaccctgcggaagtcaggctgctcatcttg
gagaacatcctactgaatccagcctatgatgtctacctgctggtggggacgtccattcgt
tacaaggttcagaagatcaggcaggggaagattacagaactctcaatgccttctgatcag
tatgagctgcagcttcagaacagcatcccagatcctcaaggagatcctacccggcctgtg
gcagtcctgacacaggacacatcaagggtcactgccatgcagatgggacagaccaacctg
gtcctgggccacaggagtatccgcatgcaaggagcttctaggctgcccaacagcaccatc
tatgtggttgaagccgggtacctagggttcacagtccaccctggtgacagatgggttctt
gagactgggcatttatatggaatcaccatcgaagtatttgataagtccagcaacaaggtc
tacccatctgacaatatccgaattgaagctgtgcttcctgctgagttttttgaggttctg
tggtcttctcagaatgggtcttatcatcacgtcagggcaatccagagtggccagacaacc
atcagtgcatccctcacttctgtggtggaccaggatggaggggtccatgtgcttcaggta
cctgtgtggaaccagcaggaagtggacattcatatccccatcacactctatcccagcatc
ctgacatttccgtggcaaccaaaggcaggagcctatcagtacaccataaaggcccatggg
ggcagtggaaatttcagctggtcttcgtcaaactacatggttgccacagtcaccgtcaag
ggtgtcatgaccacaggcagtgacactggactcagtgtgatccaggcacatgatgttcag
aaccctctccattttggtgagatgaaggtgtatgtgattgagcccagcagcatggagttt
gccccgtgccaggtggaggctcgagtgggccacaccctggagcttcccctgacaatcagt
ggtttcatgcctggtgtggccagtgagatggtcaccctaagcgactgctcccactttgac
ttggtggtggaagtggagaaccagggtgtgttccagccattgccaggaaggctgctgccg
gggcctgatcactgcagtggggtcaaggtgagagctgatgcccaggggtcaactactctc
cttgtgagctacacacacggccatgtacacttgggtgcgaagatcactcttgctgcctac
ctgcccctcaaggctgtggatccctcttctgttgctgtggtaaccctgggctcctcaaag
gagatactgtttgagggaggccccaggccatgggtactagaaccttccaaattctttcgg
aatgtcacttctgaagacacaggcagcataagtctggctctcctgggtcctccagcctcc
cgaaattaccagcagcactgggtccttgtgacctgccaggccttgggtgaacaggtcatc
gctctgtctgtggggaaccgacccagcctctctaaccccttccctgctgtggagcccact
gtggtgaagttcatctgtgccctgccttccaggctaacactcatgcctgtctatgccctc
ccgcaactggacctatcctgtccactgctacagcagaataagcaggtggttccagtatca
agtcatcgaaatcccctattagatctgggtgcctatgatcaacagggccggcgatttgat
aacttcagctctctgagcatccagtgggagtcttcccggcctttgctggctagcactgag
cctgaccagcccatgcagctggtatcccaggatgatgggaaaggccaaaagaaactacat
ggtttacagacagtttcggttcatgaggcatcaggaaccacagtcatctctgccatggca
actggctaccagcagtcccacttgagcgcagccagagtgaagacaccgcatgaccctcta
gcacctgtgtcagccgccatcgagcttattcttgtggaggatgtgagggtcagtccagag
gaagtgaccatctataaccatcccagtgttcaagtagaactccacatcacagaaggctct
ggctacttcttcctcaattccagcaccccggatgtcatcaaggtggcctaccaggatact
cggggtgtggccgtggtgcatcctctgttcccaggctcatcaactgtcatggttcatgac
ttatgcctggccttcccagccccagcaaaggccatcattcatgtctcagacatccaggag
ctgtacgtccgagtggtggacaaggtggagattggtaaggcagtcaaggcctatgtccgt
gtgttggacttctacaagaagcctttcctggccaagtacttcaccttcatggacctgaag
ctgcgagccgcctcccagataatcacgctggtgattctcgacgaagctctagacgactac
acagccacattcctcgtacatggcattgccattggccagaccagcctatctgcaagtgtg
acagacaaatctgggcagagagtcagctccaccccacaacaaattgaggtcttccctccg
ttcagattgatacccaggaaggtgacactgattattggagccatgatgcagatcacctct
gagggtggcccccagccccagtccaacatcctcttctccatcaacagtgaaagtgtggca
gcggtgagccctgctgggctggtgcgtgggctcatggttggcaatggctctgtgctgggg
gttgtgcaggcagtggatgctgagactggcaaggtcatcatcgtctctcaggaccatgtg
gaggtagaggtgctacagctccaggcagtgaggatccgtgccccaatcacacgaatgcgg
accggaacccagatgcctgtctttgtcactgggatcaccagcaaccagagccctttctcc
tttggcaatgctgtgccaggcttgaccttccactggtctgtcaccaagcgggatgtcctg
gacctccgagggcggcaccatgaggcatctatacggctcccgcctcagtacaactttgcc
atgaatgtgtatggccgggtgaaaggccggactggactgcgattggtggtcaaagctatg
gaccccacagctgggcagctgcatggccttggcaaagagctctcagatgagatccaaatt
caggtgtttgaaaagctgcgcctgctgaaccctgaaatagaagcagaacaaatactgatg
tcacccaactcacttataaagctgcagacaaacagggatggtgcggccattctgagctac
cgtgtcctcaatggacctgaaaaggttcctcttgtgcatattgatgagaaggggttcctg
gtgtccggttctggaattggggtatccaccctcgaagtgattgcacaggagccttttggt
accaaccagactgtcattgtctctgtaaaggtctctcctgtttcatacctgaggatctcc
atgagcccagttctgcacactcagcacaaggaggcgctggcggctctgcctctggggatg
accatgaccttcacagttcacttccatgacaactctggagacattttccatgctcacaat
tcagtcctcaattttgccacgaacagagatgactttgtgcagattggcaagggtgccacc
aataacacttgcatcgtccgcacagtcagtgtgggcttgacactgctccgtgtgtgggat
gtggagcacctgggcctctccgactttgtgccactacccgtcctacaggccatcacccca
gaagtgtctggagctgtggtggtgggtgacatcctctgtctggctagtgttctcattagc
ctgggaggtatctcagggacctggagctcctcagccagcaatatcctctacattgacccc
aagacaggtgtggctgtggccagagatgcagggtctgtgactgtttactatgagatcacc
ggacatctgaagacctttaaagagatagtggttggcacccctcagaagattgtggcccat
cgcctccactctgcccagaccagtatccaggaagccacagtctccaaagtgaccatcagc
gtgggagacaggagctctaacctgcttggtgagtgctcccctgcccagcgagaagtcatt
gaagccttacacccagagtccctcatcagctgtcaactccaattcaaacaagatgtcttt
gatttccctgctctcgatatcttcactgtggagccaggatttgattctgctctgggccag
tacctgtgctctgttactatgcacagactgacagataagcaactgaagcacttgagcatg
aagaagacatcattggcagtcactgcctccattcccagcagccatacctctgtagagaat
gtgggagctgaggttcccttcagtccaggcctctatgccaaccaggcagaaatcctcttg
agcaaccactataccagctctgagatcaaggtctttggtactgtggagattctggagaac
ttggaggtgaaatccggatcccctgctgtgctagcctttgtgaaggagaagtcatttggg
ctgcccagcttcatcacatatacagttggtgtctcagatcccacagctggcagccagggc
cctctgtctactgccctgaccttctccagctcttccactcaccaggccatcaccattcca
gtcactgtggcctttgtgatggatcgtcgtgggcctggtccctatggagccagcatcctg
tcacacttcctagactcctaccaagtcatgttcttcaccttctttgccctgctggctggg
acagcggtcaccatcatagcttaccacacagtctgtgcaccccgggaacttgcttcaccc
ctggctctcacaccccgtgccagccctcagcacagcccccactatcttgcctcatcgcct
gccacgttcaacacactgcctcctggtcgcaaaactagtcctccctcagggctctggagc
ccagcctatgcctctcattag
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integrated database retrieval system
