Phodopus roborovskii (desert hamster): 127238536
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Entry
127238536 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 54-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127238536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127238536
Transcription factors [BR:
prob03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127238536
BRITE hierarchy
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_jaz
zf-C2H2_6
Zn-ribbon_8
zf-met
Motif
Other DBs
NCBI-GeneID:
127238536
NCBI-ProteinID:
XP_051063103
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MAGSLVSISQGLLTFKDVHVDFSQEEWKCLDSAQRALYIDVMLENYNNLVSVEKYFICDP
VHQLGKTEKESCQCNELGNIFHDPSTCALFRTSETVENSNNYGCSNYRDASVDSSNPERH
ESMHTGEEPCNSKESEKSLNVCSSITQHHRLYTAKSKHREGEYERLDTTYSLFQQPICIG
KKPYQCGKCKKFYSTSSYLTVHQRIHTGEKPYKCKDCDKSFIMKSSLIKHERIHTGEKPY
TCKDCNKSFNVSSNLTMHKXRIHAEKKPYKCKDCDKSFSTRPCLTVHQKIHTGEKPYTCK
DCDKSFIMKSKLMQHQRIHTGEKPYTCKDCNKSFNVRSYLILHQRIHTGEKPHKCKDCDK
SFTMKTTLTVHQRIHTGKKPYTCKDCDKSFVMKSKLTQHQRIHTGEKPYKCKDCEKSFAV
RPTLREHQRIHTGEKPYKCKDCEKSFTAKSTLTQHQRIHTGEKPYKCQECDKSFTTCTYL
REHQKIHTGKKPYKCGECSRSFATLTYLKKHQKIHTGXKPYNPAPWRSRTVQIWVRRTRR
VPRGPENSGAAVSTLAAWKSHSQQRSGGNRSPAALEPPSVLLSTVDFAISDMNVHTVGNT
VFRKVSLPGLMDRCQLKASSVYLQTSRIVTSVDIQGCGCELHMGGVGMPGLCSEGFVHXC
DVGELQQPGLCG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctggttctctagtaagcatatcccagggtctattgacattcaaggatgtgcatgtg
gacttttcccaagaggaatggaagtgcctggactctgctcagagggctttgtacattgat
gtgatgctggagaattacaacaatctggtctctgtggagaaatatttcatatgtgatcct
gtccatcaactcgggaaaactgaaaaggagtcttgtcagtgtaatgagctcggaaatatt
tttcatgacccctctacatgtgcactttttagaacgagtgaaactgtagaaaactctaat
aactacggatgcagtaattacagggatgcctccgttgactcatcaaacccagagagacat
gaaagcatgcacactggagaagaaccttgcaattctaaagaaagtgagaaatccttaaat
gtgtgttcaagcattactcaacatcacagactctacactgcaaagagcaagcacagggag
ggagaatatgaacgtcttgacactacatatagtctttttcaacaaccaatctgcattgga
aagaaaccataccagtgtgggaaatgtaaaaaattctatagtacttcttcatatctcact
gtgcatcagagaattcacacaggagagaagccttacaaatgtaaagactgtgacaaatcc
tttattatgaagtcaagtcttataaaacatgaaagaattcataccggagagaagccttac
acatgtaaggactgcaacaaatcctttaatgtgagttcaaatcttacaatgcataaanna
agaattcatgcagaaaagaagccttacaaatgcaaagactgtgacaaatccttcagtaca
aggccatgtcttacagtgcatcagaaaatacatacaggagagaagccttacacatgtaag
gactgtgacaaatcctttattatgaaatcgaagcttatgcagcatcaaagaattcataca
ggagagaagccttacacatgtaaggactgtaacaaatcgtttaatgtgaggtcatatctt
atactgcaccagagaattcatacaggagagaagcctcacaaatgtaaagactgtgacaaa
tcctttactatgaaaacaactcttacagtgcaccagagaattcacacaggaaagaagcct
tacacatgtaaggactgtgacaaatcctttgttatgaagtcaaaacttactcagcatcag
agaattcatacaggagaaaagccttacaaatgtaaggactgtgagaaatcctttgctgtg
aggccaactcttagagagcatcaaagaattcatacaggagaaaagccttacaaatgtaag
gactgtgagaaatccttcactgcaaagtcaactcttacacagcatcagagaattcataca
ggagagaagccttacaaatgccaggaatgtgacaaatcatttaccacatgcacatatctt
agagagcatcagaaaattcatactggaaagaaaccttacaaatgtggagaatgtagcaga
tcttttgctacactcacatatcttaaaaaacatcagaaaattcatactggttagaaacct
tacaatcctgcaccttggaggagtcgcacggtgcagatctgggtgcggaggacacggcgg
gtgccgcggggacctgaaaactccggagccgcagtctccacgcttgcggcctggaaaagt
cacagtcagcagcgcagtggcgggaaccgcagcccggcggccctggaacctcccagtgtg
cttttatccaccgttgattttgccatctcggacatgaatgtgcacactgttggaaacaca
gtattccgcaaagtgtctttgccaggccttatggaccgctgtcagttgaaggctagtagc
gtgtacttacagacttcaaggatagtcacttctgttgacattcagggatgtggctgtgaa
cttcacatgggaggagtgggaatgcctggactctgctcagagggctttgtacattgatgt
gatgttggagaattacagcaacctggtctttgtgggtga
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