Phodopus roborovskii (desert hamster): 127238811
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Entry
127238811 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 54-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127238811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127238811
Transcription factors [BR:
prob03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127238811
BRITE hierarchy
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_6
zf-C2H2_11
zf_UBZ
zf_C2H2_ZHX
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
127238811
NCBI-ProteinID:
XP_051063509
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MNSSLVNAPQNLLSFRDVAVDLSQEEWECLDCAQRALYMDVMLENYKNLVFVENHCICGK
YETVMDQGTKHIVQGHMDIQEKHSQYNGLGKVIHESSESTPYDRKDIAENCEDWFFNHRD
ASVESLNTDRHKSEDTGEEPYKYRESVNFLDLCSITSQNQRLHTGKEEHKNTEYGKSFDS
KCVLTVRATSAKKPQQCKKCGKWFKMYSSLSKHQRAHTIKKSYKCTKCSKSFLYMSHLKV
HYKIHSGEKPYKCTECGKCFFHASHLERHYRFHTEEHTYKYSVCGKSFICCTGLIKHQKT
SGWERLPECKQGTRVFYTWSHLEYHGRTYTGEKLYICNECGKSLYTFSGLKRHQRIHTGD
KPYKCNECEKSFTQNVSLRTHQRIHTGEKPYKCNECDRSFTRKFYLRTHQRIHTGEKPYK
CSECDKSFTQKSNLRSHQRIHTGEKPYKCCECENLFTCGSHLRRHQRIHTGEKLYKCSEC
EKSFIHGADLRRHQKVHTGVKPYKCSECNKSFTQKGSLRTHQRIHTGEKPYNCSECDKSF
IRKFYLRTHQRIHTGEKPYQCSECGKSFSQKFNLRAHQRIHSGEKPYKCSQCEKSFIQKA
NLRTHQRIHXGEKPYECRIFTCLSSLRKHLKINTWGEKFPWETLSCALSKLCP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttctctggtaaatgctccccagaatctgttatcattcagggatgtggctgtg
gacctctcacaagaggaatgggaatgtctagactgtgctcagagggctttgtacatggat
gtgatgttggagaattacaaaaatctagtttttgtggagaaccattgcatatgtggtaaa
tatgagacggttatggatcaaggtacaaagcacattgtccagggtcatatggatatccaa
gaaaagcattcccaatataatggacttggaaaagttattcatgaatcttctgaaagtaca
ccatatgacagaaaggacattgcagaaaactgcgaggactggttttttaaccacagagac
gcctctgttgaatcattaaacacagacagacataaaagtgaggacactggagaagaacct
tacaaatacagagaaagtgtaaactttttagatttgtgttccatcactagtcaaaatcaa
agactccacacaggaaaagaagaacacaaaaatacagagtatggtaaaagttttgactct
aaatgtgtactcacagtgagagccactagtgcaaagaagccacagcaatgcaagaaatgt
gggaaatggttcaagatgtactcaagcctcagtaaacatcagagagctcatactataaag
aaatcttataaatgtacaaaatgtagtaaatcttttctgtatatgtcccatctcaaagtt
cattacaagatccattctggagaaaaaccttacaaatgtactgaatgtggtaagtgcttt
tttcatgcatcacacctggaaagacattacagattccacactgaagagcatacttacaaa
tatagtgtttgtggcaaatcctttatctgctgtacaggtcttataaaacatcagaaaact
agtggatgggagaggcttcctgaatgtaagcaaggtactagagtgttctatacatggtca
caccttgaataccatggtagaacctacacaggggaaaaactttatatatgtaatgaatgt
ggcaaatccctttatacattttcaggtcttaaaagacatcagagaatccacacaggggac
aaaccatacaaatgtaatgaatgtgagaaatcctttacccagaatgtaagtcttagaact
catcagagaatacatacaggagagaaaccatacaagtgtaatgaatgtgacagatccttt
accaggaaattctatcttagaactcatcagcgaatacatacaggagagaaaccttacaag
tgtagtgagtgtgataaatcatttactcagaaaagcaatcttagaagtcatcagagaata
catacaggagagaaaccttacaaatgttgtgaatgtgagaatctctttacctgtggctct
catcttagaagacatcagagaatacatacaggagagaaactttacaaatgtagtgaatgt
gagaaatccttcatccatggtgcagatcttagaagacatcagaaagttcatacaggagtt
aaaccttacaaatgcagtgaatgtaacaaatcctttacccagaagggcagtcttagaact
catcagagaatacataccggagagaaaccttacaattgcagtgaatgtgacaaatccttt
atcaggaaattctatcttagaactcatcagagaatacatacaggagagaagccttaccag
tgtagcgaatgtggcaaatccttttcccagaagtttaatcttagagctcatcagagaatt
cattcaggagaaaagccttacaaatgtagtcagtgtgagaaatcttttattcagaaagcc
aaccttagaacacatcaaagaattcatnnaggagagaaaccttatgaatgtcgtatcttt
acttgtctctcaagtctaagaaaacacctgaaaattaatacctggggagaaaagtttcca
tgggaaactttgtcatgtgctttgtccaagctctgtccttag
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