Planococcus rifietoensis: AUC31_05385
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Entry
AUC31_05385 CDS
T04201
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prt
Planococcus rifietoensis
Pathway
prt03420
Nucleotide excision repair
prt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUC31_05385
03430 Mismatch repair
AUC31_05385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prt03400
]
AUC31_05385
Enzymes [BR:
prt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUC31_05385
DNA repair and recombination proteins [BR:
prt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUC31_05385
MMR (mismatch excision repair)
Other MMR factors
AUC31_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
HHH_3
AAA_22
Terminase_6N
FWWh
Motif
Other DBs
NCBI-ProteinID:
ALS74691
UniProt:
A0A0U2XNN1
LinkDB
All DBs
Position
687902..690118
Genome browser
AA seq
738 aa
AA seq
DB search
MELITKNLLRGMNPEQEEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVLEKQVYPSNIL
AITFTNKAAREMRNRIDGLLGHGTGDRMWVSTFHSMCVRILRRNIDRLGFSKSFSILDTT
DQLTVIKNVLKQQNLDPKKYEPRTMLNAISSSKNECIDAETFAANANQFNPYEKTVAEVF
TGYQKRLQKNQSLDFDDLIMMTLRLFETVPDVLEYYQDKFHYIHVDEYQDTNNAQYQLVQ
LMAKKFKNICVVGDSDQSIYRWRGADITNILSFEKDYPDAKVIMLEQNYRSTKRILQAAN
DVIQKNTSRYPKELRTDNDEGPAITLHKAGDERQEAQYIVQTIQNLMQEEGYKTSDFAIL
YRTNAQSRILEEMFVKSNMSYTIVGGTKFYDRKEIKDLLAYLRLIANNEDDLSLARIINE
PKRGIGATSFEKMARFAIEQDRTIMDSLQEADFMGLTAKTAQTALEFRAMIAGFTEMQEF
LSVTELVEEVLKKSGYRQMLQNDKTIEGESRLENLDEFLTVTQAFEKQSDDKSLVAFLTD
LALIADIDSLDEEEEQGDGPIILMTMHAAKGLEFPVVFIAGLEENVFPHSRSNNDEEELE
EERRLAYVGITRAEKRLYLTHASSRTIFGKSNFNLPSRFISEISEDLIEQTFANHRAGAA
TSYKQAPKRKAVIKPSYQASGGDRLGWKTGDRAKHKKWGTGTVVNVKGDGEQTELDIAFP
SPTGIKRLLAKFAPIEKE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaattaatcacaaaaaacctgctgcgggggatgaaccccgagcaggaagaagcagtc
aaaacaacagaaggcccgctattgataatggccggtgcgggatccgggaaaacacgcgtg
ctgacacatcgcatcgcgtacttggtgctggaaaaacaagtctacccgtccaatatccta
gcaattacgttcaccaataaagcggcgcgcgaaatgcgcaaccgaatcgatgggctgctc
ggccacggaacaggcgaccgcatgtgggtatcgacattccactcgatgtgcgtgcgcatc
ctgcgccgcaatatcgaccggctcggcttttcgaaaagcttctcgatcttggatacgact
gaccaattgacggtcatcaaaaatgtcttgaagcagcaaaatttagaccccaaaaaatac
gaaccgcggacgatgctgaatgccatttcatcgtcgaaaaacgaatgtatcgatgcggaa
acctttgcggcaaacgccaatcaattcaacccgtatgaaaaaacggtcgcggaagtgttc
acaggctaccagaagcgtctccagaaaaaccagtcgctcgatttcgacgatttgatcatg
atgacattgaggctctttgaaacggtaccggatgtgctggaatattatcaggataaattc
cactatatccatgtcgatgaataccaagatacgaacaacgcccagtaccaactggtgcaa
ttaatggcgaagaaattcaagaatatttgtgttgtcggcgattccgatcagtcgatttac
cgttggcgcggtgcggatatcaccaatattctgtcattcgaaaaggattatccggacgcc
aaagtaatcatgctcgaacagaattaccgttcgaccaaacgcattttgcaggcagcaaat
gacgtcatccagaaaaacacgagccgctacccgaaagaattgcgcaccgacaacgacgaa
ggaccggcgatcacgctccataaagcgggtgatgagcgccaggaagcccagtacatcgtc
cagaccatccaaaacctcatgcaggaagaaggatacaaaacctctgacttcgccattctt
taccggaccaatgcccaatcgcgtattttagaggaaatgttcgtcaaatcgaatatgagc
tatacaatcgtcggcggcacgaagttctatgaccgcaaggaaatcaaggacttgctcgcg
tatttgcgcttgattgccaataacgaagatgacctgtcgctcgcgcgcatcatcaatgaa
ccgaagcgagggatcggtgcgacgtcattcgagaaaatggcgcgctttgccatcgagcag
gaccgcaccatcatggattccttgcaggaagcggatttcatgggcttgacggcgaaaacc
gcacagaccgcgcttgaattccgtgcgatgatcgccggattcaccgaaatgcaggaattt
ctgtcggtgacggaattggtggaagaagtgctgaagaaatccggttaccgccagatgctt
caaaacgacaagacgatcgaaggcgaaagccgcctggagaacttggatgaatttctgacc
gtgacgcaagcgttcgaaaaacaaagcgatgacaagtcattggtagcgttcctgaccgat
ttggctttgattgcggacatcgattcactggacgaggaagaagaacaaggcgacggcccg
atcatcctcatgacgatgcacgctgcgaaaggtttggaattcccggtcgtgtttatcgct
ggtttggaggaaaatgtcttcccgcactcgcgttcgaacaacgacgaggaagaattggaa
gaagaacgccggcttgcttatgttggcatcacgcgtgccgagaaacggctgtatttgacg
catgcctcgtcacggacgattttcggcaagagcaatttcaatctgccatcgcgcttcatc
tctgaaatttcggaagatctcatcgagcagacgtttgccaatcaccgtgcaggcgcagcg
acgagttataaacaggcaccgaaacgtaaagcggttataaagccttcctaccaagcatcc
ggcggcgatcggctgggctggaaaacaggcgaccgcgcgaagcataaaaaatggggcaca
ggcactgtcgttaatgtcaaaggcgacggcgaacaaacagaactcgatatcgccttccca
agcccgacaggcatcaagcggctgctcgcaaaatttgcgccgatcgaaaaagaatga
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