Planococcus rifietoensis: AUC31_13390
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Entry
AUC31_13390 CDS
T04201
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prt
Planococcus rifietoensis
Pathway
prt03420
Nucleotide excision repair
prt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUC31_13390
03430 Mismatch repair
AUC31_13390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prt03400
]
AUC31_13390
Enzymes [BR:
prt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUC31_13390
DNA repair and recombination proteins [BR:
prt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUC31_13390
MMR (mismatch excision repair)
Other MMR factors
AUC31_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_22
SNF2-rel_dom
AAA_11
ResIII
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
ALS77098
UniProt:
A0A0U2YR24
LinkDB
All DBs
Position
complement(2576940..2579069)
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AA seq
709 aa
AA seq
DB search
MSDFFERKKQELGVELNKIQKKAVTKTEGPLLLLACPGSGKTTTMIMRIGYLIEERAVQP
KRIKAITFSKASATDMLERYARFFPGLAPVDFSTIHSLAFQITRDYLSADDYIMIEGGDS
NRLNKKRLLKDIYARENDEPITDDLLEELVSFISFVKNKMVPKKKWKTLDEPFPSAIDIL
TIYEEYKEHHEPRLVDFDDMLTIAFEALNTDRKLLSKYQQRWDYVMTDESQDTSMVQHAI
VEKLVENHRNLCVVADDDQSIYTWRAAEPSYLLKFRQVYPDAYIMKMERNYRSSGTIVNT
ANQFIKANKLRHDKNMFTDRPEGGPIVIRRLASQEAQLKYLLKELSTLEEYGNVAILYRN
NSSSTLLMDELDRLGIPFYMKDADNRFFSHWIVQDILNFMRFSLRPERVDLYSKIASKTN
AYWSASQLKQLGRMQPTKQHAFEEITLAITMKDYQLRIIAEQRKSMDALKDMPPLKVIQS
IRRDMGYDQMLKSRAEKFGMKLDYLQQILSTLEQIAEPLPTMMDFAKRLKQLEDVTKQAK
TEKTDDMLTLSTLHSSKGLEFDRVYLIDLVEGIVPTEEDADDPALLEEARRLFYVGMTRA
KRHLELLSYDKESRFVEEVRRIALPKMKRAGIVKQSAPKAPKAKITVPDNPDAVRSVEEL
RVGANIRHRVFGNGRITDLDDEKVGIQFAKEHKEFLLEICLQYQLLELA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttttttgaacgaaaaaaacaagagctcggtgtcgagctgaataaaatacag
aaaaaagcggtcaccaagacagagggcccgctattgcttctcgcatgcccgggttccggg
aaaacgacgaccatgattatgagaatcggctatttgatcgaagaaagagccgtgcagcca
aagcgcatcaaagcgattaccttcagcaaggcatcggcgaccgatatgcttgaacgctat
gcacggtttttcccaggacttgctccggtggatttttccacgattcatagcttggctttt
caaatcacgcgcgactatctatcggcagacgactacatcatgatcgaagggggcgattcg
aatcgcctgaataaaaagcgcctgctgaaagacatctacgcccgtgaaaacgatgagccg
attaccgatgatctgttagaagagttggtgtcgttcatcagttttgtgaaaaacaaaatg
gtgccaaagaaaaaatggaagaccttggatgaacctttcccaagcgccatcgacatttta
acgatctacgaagagtacaaagaacatcatgagccgaggcttgtagatttcgatgatatg
ctgacaatcgcttttgaagcgctgaatacagaccgtaagctcttgtcaaaatatcagcaa
cgctgggactatgtcatgacggatgaaagccaagacacgtccatggtccagcatgccatt
gttgagaagctggtcgaaaaccaccgcaatttatgcgtcgtggcggatgacgaccagtcc
atttatacgtggcgggcggcggagccgagctatttgctcaaattccgccaggtgtacccg
gatgcctatatcatgaagatggaacgcaattaccgatcatctgggaccattgtcaacacg
gccaatcaattcatcaaagcgaataaattgcgccatgataaaaacatgttcaccgacagg
ccagaaggcggaccgatcgttattcggcgcctcgcctcgcaagaagctcagttgaagtat
ttgttaaaagaactttccactcttgaggaatacggaaatgttgcgattttgtaccgcaat
aattcctcttcgaccttgctgatggatgagctggatcgcctcggcatccctttctatatg
aaagatgcggacaaccgctttttcagccattggattgtccaggacattttaaattttatg
cgtttcagcctgcgtccggaacgggtggatttatattccaagatcgcttcaaagaccaac
gcctactggtccgcctctcagctcaagcaattagggcggatgcagccgacaaagcagcat
gcgtttgaagaaatcaccttggccattaccatgaaggattaccagcttcggatcatcgca
gaacagcggaaatcgatggacgcattgaaggatatgccgcctttgaaagtgattcagtcc
atccggcgcgatatgggctatgaccagatgctcaaaagccgtgcggagaaattcggcatg
aagctcgattacttacagcagattctcagcacgctcgaacaaattgccgaaccgcttcca
acgatgatggatttcgcgaaacgcttgaaacagctggaagacgtgacaaagcaggcgaaa
actgaaaagaccgatgatatgttgacattgtccacgttgcatagctcaaaaggcttggag
tttgaccgggtttatttgattgatttggtggaagggattgtgccaacagaagaagacgcc
gacgatcctgcgttgctggaggaagcaaggcgcttgttctatgttggcatgacacgtgca
aaacgccacctggaattgctcagctacgacaaggaatcgcgcttcgtggaagaagtgcgg
cgcatcgccttgccgaaaatgaagcgcgcgggaatcgttaaacaatcagcgccgaaagcc
ccgaaagcaaaaattacagtgccggacaatcccgatgcggtccgttctgtagaggaattg
cgggtgggtgcgaatatacgccaccgcgtcttcgggaatgggcggattacggatttggat
gacgagaaagtcggcatccagtttgccaaagagcataaagagtttctattggaaatttgc
ctgcaatatcaattgctcgaactggcataa
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