Planococcus rifietoensis: AUC31_16280
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Entry
AUC31_16280 CDS
T04201
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
prt
Planococcus rifietoensis
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prt03400
]
AUC31_16280
Enzymes [BR:
prt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUC31_16280
DNA repair and recombination proteins [BR:
prt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AUC31_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
CARD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALS76671
UniProt:
A0A0U2XIC0
LinkDB
All DBs
Position
complement(1971240..1974845)
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AA seq
1201 aa
AA seq
DB search
MIPEKPNDATWTDEQWQAIWAKGQDMLVSAAAGSGKTAVLINRMIEKVLDEHDPISVDEL
LVVTFTNASAAEMRHRMSAALEQAVTAQPESVHLKKQLRLINKAQISTLHSFCLQVVKQY
AYLLEIDPGFRIAGDTEAALLRDDIMEAVLESAYEGEGREKVYRLADSFTSDRSDQAMEI
LLGKLYDYSRVHPEPEAWLEQLPTLYDVPGHATIDDLPFMEDLKMTIRHSFEAALALLDE
GWELATRPEGPAVLEENFRMDATLIRAAIDALDESWASLHAYARNIKWERLASVKKDSCD
PQLAEEAKARRNEAKKLFNDVKEGYFTRAPERLLAEMREMAPLMRTLVDLTKRFAEEYKA
LKIDRGLVDFSDLEHYALEILSDGGEPSAIAQDYRTRFKEVLVDEYQDTNMLQETILGLV
KSGSEQDGNLFMVGDVKQSIYRFRLAEPMLFLGKYSRFSREADETGLRIDLNANFRSRKE
VLDGTNYIFSQIMGERVGEISYDEDAALKPKAPYPEEDVPIHLTLIHEPETEEEEEVPVD
MDKSQWEARWIAQKIRHMMDAGTLVHDPWSGKERPLEYRDIVVLMRSMTWSGDFSDEFKM
AGVPLYAELSGGYFDALEVMIMLNTLRVIDNPYQDIPLAAVLRAPFFGLQENELAAIRLA
DAKGTFYDALKAFIRIGTMDEATRLKLARFTNSLRTWRDLARRGSLSELIWKVYLDTNYY
EMTGAMSNGKQRQANLRALHDRALEYEKTAFRGLFRFLRFIDRMRERGDDLGTAKSLSEK
ENVVRLMTVHKSKGLEFPVVFFAGTGRPFNEMDFHKPYLFDQQYGLAVKAVNPDTRIEYT
SLPYLAVKEMKQLQMKAEEMRVLYVAMTRAKEKLYLTASVKDIDRLLEKWKTSSGDVLLP
DFKRSRAKSYLDWIGLAVSRHPDAEALHVGGEVLDHHSRFHIDIVETVSLEEPQPLLEAQ
QDRPEAEADAALIRSRFDFAYPHQAAVEKRSKQSVTEMKRLQLLQRSDEPESFIQNYQPK
AQKKAPHRPDFLMDRKLSAADIGTAVHTVMQHLPLERQLDLDEIRQFLDELTGREILTKE
EAQAVKPEQVEAFFHSTIAQRLMNAKDVRREVPFTYARADEDGDHQIVQGIVDCLFKEND
EWILLDYKTDQTRGMGNVQSAMKERYSLQLSVYQEAVEAILRIPIKQRVLYLFSTNEEVE
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgataccggaaaaaccgaatgatgccacatggacggatgaacaatggcaggcgatatgg
gcgaaaggacaggatatgctcgtatcggctgcggcaggttccgggaaaacggctgtcctg
atcaaccggatgatcgaaaaagtgctcgatgaacatgatccgatatcagtcgatgagctt
ttggtcgtcacctttacgaacgcttccgcagcggaaatgcgccatcgcatgtctgcagct
ttagagcaggcagtcacggcacagccggaatccgttcacttgaaaaagcagctgaggctg
atcaataaagcacagatttcgactttgcattcgttttgcctgcaagtcgtgaagcaatat
gcttatttgttggaaatcgatcccggcttccgcattgcgggggatacggaagcggcattg
ctgcgcgatgatatcatggaagcggtgcttgaatccgcctatgaaggcgaagggcgtgag
aaggtttacaggctcgcagacagttttacttctgaccgcagcgaccaggcaatggagatc
ctgctgggcaaattatacgattattcacgtgtgcatcctgaaccggaagcttggctcgaa
caactgccaacgctatacgatgtgccgggacatgccacgatcgacgatctgccgtttatg
gaagatttgaaaatgacgatacgtcatagttttgaagcggcgcttgccttgctcgatgaa
ggttgggagctagccacccgtccggaaggccctgccgtattggaagagaactttcggatg
gatgctacgctgatccgtgccgcaatcgatgcactggatgaatcttgggcatcacttcat
gcttatgcacgaaacattaaatgggagcgtttagcatccgtgaaaaaggattcctgcgac
ccgcagctggcggaagaagccaaagcacggagaaatgaagcgaaaaaactgttcaatgat
gtaaaagaggggtatttcacccgcgcccctgagcgcctgcttgcggaaatgcgcgaaatg
gcaccgcttatgcggacattggtcgatttgacgaagcgttttgcggaagaatacaaggcc
cttaaaattgaccgcggtttggtggatttctcggatttggagcattacgcgctggaaatc
ctgagcgatgggggagaaccttctgcgatcgctcaggattaccgcacacgcttcaaagaa
gttttggttgatgaataccaggatacgaatatgctgcaggaaacgatactcggccttgtg
aaatcgggatcggaacaagacggcaatttattcatggtaggggatgttaaacagtccatc
taccgttttcgactggcggagccgatgctcttcttaggcaagtattcccgctttagccgg
gaagcggacgagacagggttgcgaattgatttaaatgccaatttcagaagccgcaaagaa
gtgctcgatggcaccaattatatcttttcgcagatcatgggcgagcgcgtcggtgaaatc
agctatgacgaagatgcggcattaaagccgaaagcgccttatcccgaagaagatgtgccg
attcacttgacgcttatccatgaaccggaaacggaagaagaggaagaagtgcctgtcgat
atggacaagtcgcaatgggaagcgcgttggattgcgcaaaagattcgccatatgatggat
gcgggaacgctcgtacacgatccatggagcggaaaagagcgcccgcttgaataccgcgac
attgtcgtattgatgcgttcaatgacttggtcaggtgacttttccgacgaattcaaaatg
gctggcgtccctctttacgcagagttgagcggcgggtatttcgatgctcttgaagtcatg
atcatgctcaatacattgcgcgtcatcgataacccgtaccaggatattccgcttgccgcc
gttttgcgcgcgccgtttttcggcctacaggaaaatgagttggcagcgatccggcttgcc
gatgcaaaaggaactttttatgatgcattgaaagcgtttatccgcatcggtacgatggat
gaagcgactcgacttaaactggcccgctttacgaacagcctccgtacttggcgggatttg
gcgcgcaggggctcgttgtcggaattgatttggaaagtgtacctggatacgaattactac
gaaatgacgggtgctatgtcgaacggcaagcagcgccaagcgaatctgcgtgcccttcat
gaccgagcacttgaatacgagaaaactgcttttcgcggattgttccgattcctgcgcttc
atcgaccgcatgcgggagcggggagacgaccttggaactgcaaagtcattgagcgaaaag
gaaaatgtcgtgcggctcatgaccgtccataaatcgaaaggccttgaatttccggtcgtc
ttttttgcgggaaccggaaggccgttcaatgaaatggatttccacaaaccgtatttattc
gaccagcaatacggccttgcggtcaaggccgtcaatcccgatacacgcattgaatacact
tcgctgccttatcttgccgttaaagaaatgaaacaattgcagatgaaggctgaagagatg
cgggtgttgtatgtggccatgacccgtgcgaaagaaaagctctacttgaccgcttcggta
aaagacattgaccgtttactcgagaagtggaaaacttcctcgggcgacgtgctcttgcct
gattttaaacgatcgcgcgcaaaatcttatttggattggatcggccttgctgtttcaagg
catcccgatgcagaggcgctgcatgtaggcggcgaagtgctcgatcatcattcgcgcttt
cacatcgacattgtcgagaccgtttccttggaagagccgcagcctttgctcgaagcgcaa
caagaccggccggaagccgaagcggatgcagcattgatccgcagccgattcgacttcgct
tatccccatcaggcagctgtcgaaaaacgttctaagcaatcggtgacggaaatgaagagg
cttcagctattgcagcgttcggatgagccggaatcgttcatccaaaactatcagccgaag
gcgcaaaagaaagcgccgcatcgcccggatttcctgatggaccgcaaactgtcagctgca
gatatcggtacggcagtccacaccgtcatgcagcatttgccgcttgagcggcagctggat
ctagatgaaatccggcagttcctggatgagttgacaggacgtgaaattcttacgaaggaa
gaagcgcaagctgtaaaacctgagcaagttgaagcgtttttccacagtacgattgcacag
cgcttgatgaatgcaaaggatgtcagaagggaagtgccttttacgtatgcacgcgctgat
gaagatggcgaccatcaaatcgtccaaggtatcgttgattgcctgttcaaggaaaacgat
gaatggatcttgctcgattataaaaccgatcaaacgcgcgggatgggcaatgttcaatcg
gccatgaaagagcgctactcgcttcagttgtcggtctatcaagaagcggtagaagcgatt
ttgcgcattccgatcaaacagcgagtcctgtatttgttctctactaatgaagaagtggaa
gtttag
DBGET
integrated database retrieval system
