Pyrgilauda ruficollis (rufous-necked snowfinch): 121351524
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Entry
121351524 CDS
T07608
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
121351524
NCBI-ProteinID:
XP_041319634
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All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MVMLLFPMQLLAVAVTVYLELVRSAQGGAYYGLKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHLGKEVPRMPYGKEYPHLPQYRKEVPQMPMLGKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGPPGIGKPGQDGMPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEEGAVGAPGPV
GPKGEPGLQGFPGKPGFPGEVGGPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAVGQYLPEVGPGIEGLKPPYGYKGKK
GKAGGIVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAY
HLHCKGANVWVALYKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgctgctcttccccatgcagctgctggcagtggctgtcactgtttacctagag
ctggtgaggtctgctcaaggtggtgcctactatgggctcaagcagctgccacctcaggtg
ccccagtaccaacccctcggacaacaagtacctcacatgccgctgggcaaagaaggcatc
ccgatgcagcacctgggcaaggaggtgccccgcatgccctacgggaaggagtacccccat
ctgccccagtacaggaaggaggtcccgcagatgcccatgctcggcaaggatatggctccc
aagaaagagaaagaaattcccatgcgcagtctgaggggtgagcaaggtcccccgggtgag
cctggaccaagagggccaccagggccaccaggattaccaggtcatggtgtaccaggagcc
aaaggaaaaccaggcccgcaaggatacccaggaattggaaagccgggtttgccagggatg
ccaggaaaaccaggggtcatggggcccccagggccaagaggggagatggggccaaagggg
gagattgggcccatggggatacctggaccgcaaggaccaccagggcctcatgggcttcct
gggatagggaaagcgggtgctccgggactgcaggggcaaccagggccaaagggtgagcct
gggatgaaggggccaccaggaatccctgggatcccagggccaaaaggggagaagggggtc
gggatcccaggtttgccaggtctgaagggtccacctgggctgcctggtccgcccggcccc
gtgggattgccaggggttggcaaacccggcatggttggcttccctggcccacagggaccc
ctgggcaaacccggacccccaggagagttgggtctgcaggggcctccaggggcccctggg
atccaaggccctcccggcccgcctggtattggcaaaccaggccaggacggcatgcccggc
cagcccggcttcccgggcggcaaaggggagcagggattgccaggcctgcccgggcccccc
ggcctccctggggttgggaagccgggcttccccgggcccaaaggggagcgaggtgtgggt
ggtctgcctgggcccctggggccgaagggggagaaggggcacgcggggccacctggcatg
ggagggccaccaggggagcccggccagccaggactgccgggcatcatgggccccccgggg
gccgccggtttcccgggacctaaaggggaggaaggtgccgtaggggcaccaggaccagtc
ggccccaagggggaacccggcctgcagggttttccaggaaagccaggctttcctggggaa
gtgggtggccctgggctgcgggggctgccgggtcccacaggacccaagggggaagccgga
cacaaaggcttgccggggctgccgggagtcccgggtcttgtggggccaaagggtgagccc
gggctccccggtgcccaggggcttcaaggcccctcgggcatcccgggcatcgcgggaccc
agtggtcccatcggcccccccgggctgccaggggcgaagggggagccaggcatgcccggc
ccccccggcttccctggggtaggcaaacctggtgctgcggggctgcagggacccccggga
aagccgggcgcgctcggtccccctggccagcctgggctccaggggccacccggccccccc
gggccgccaggtcccccggtcatcatcccacccactccaccagccgtgggacagtacctg
cctgaggtggggccagggatagaaggcttgaagcccccctacggctacaagggcaagaaa
ggcaaggctggcggcattgtctacgagatgcccgcattcacggcagagctcctcacgccc
ttcccccgcgtcggggtacccgtgaagttcgacaagctcctgtacaacggccggcagaac
tacaacccgcagacggggatcttcacctgcgagatccccggcgtctactacttcgcctac
cacctgcactgtaaaggcgccaacgtgtgggtggcgctgtacaagaacaacgagccgctc
atgtacacctacgacgagtacaagaagggcttcctggaccaggcttcgggtagcgccgtg
gtgcagctgatgcacggagacaaggtttacgttcagatgccatccgagcaggcggcagga
ctctatgccgggcagtacgttcattcgtctttttcagggtatttattgtatcccatgtaa
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