Pyrgilauda ruficollis (rufous-necked snowfinch): 121352919
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Entry
121352919 CDS
T07608
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121352919 (FYCO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121352919 (FYCO1)
Membrane trafficking [BR:
pruf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121352919 (FYCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Motif
Other DBs
NCBI-GeneID:
121352919
NCBI-ProteinID:
XP_041322239
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MAATSGESQLQRIIRDLQDAVTELSKEFKEGGEPITDDSVNLQKFSYKLEYLLQFDQKEK
NTLLGNRKDYWDYFCDCLAKIKGANDGIRFVKSITELRTSLGKGRAFLRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLNSKMSSDIVGQLYELTDVQFDLASRGYDLDAAWPAFAR
RTLSSLGSSAYLWKPPSRSSSMSSLVSNYLQAQEFPSSPDVNNSLNAEHLEGYEEMRLEL
DQAELRQRELQDRIHQLEIENQELQAAVSLQKEQVQVEKEKSNNYSEENSRLTKMITELQ
KQYEVSHSTQSTVHDLQKCLQSLELSAVEQQKEHSTKVEQLLTSKEDCASKLQVSNQELE
TSRALIAVKDLCIDELKAKLSSTEQKNLNLLAKVDAALEEKGQQATAQYDSALQIRALLE
KLQEMEKEKADMQRLNAEHASQLKAAREELLLKEQAQKELESRYSSLTANSKEESEKLTG
SLETMAKEKDALQEALTLKGKEMAELQTQVMGSLAQVGLLEKNLEEARKEKEKLEEEYGR
REGALKQEAQLQAEQLELQEGRLTKVSQTVCSLQEQNQKLMSEKEHLRQKVKELEEQMEQ
QNSAVSELDEESRKLKAENENLQQSKKKMEEKLKNLEASKASLEADVARLRASEKQLQSE
IDDALVSVDEKEKKLRSENKQLDEDLQNARRQSQILEERLEALHSEYEELKQREETSKES
YASLEAQMKSAKQHGLQMEKSLDTLKESKESLQSQLTQKEVELQGMESQCQQLRAEAERH
RKRAETLEIEKLSVEKTCLHQTKLIESLTSEKESVEKQQLQQSASLEKEAKELAFRLTMS
EEQLEVNRGEVSRLQAEVLDLRVKLQQATDERERMRGELAVTETVLSEQKTLVQQLKEQS
ESLNRNHVQELVQCKEREDKLKKEQERTAHQKAELENNLMNLREELSKVKRYLENARVEN
EENKDLLHRTNTDMAELGIQICALTSEKVDAEEQLAQATERFKELEEQAAEQQEKLKLDI
SNLREENKSLQEKLEEAQMCAAAVPSLQLQLETIKKQAQSFQETSQEELSAIKFQMSTEI
LNYQTKFKAASEECGKVREQLEEQKRQQHAAEEEITELQAANTSLCRKLDEARQQLSESE
SARLQKEEEVTSLRELLERIQKEADEAKEKILDYTEKLSKVAADKDSSDQKLFAELDDLT
RTKQFLEERLIELIRDKDALWQKSDALEFQQKLSAEQRWQGDTEVNHCLDCQREFSWMVR
RHHCRMCGRIFCYYCCNNYMVTKPAGKKERCCRACFNKPRVFVDSTDDSGSSANQEGSPA
SLESPVSPPERAFVANEDSKPPDDAAFDIITDEELCQVQESDSLHNESQMEKDSLDQSVT
DLCVCWAKQLLGALYSLQSPFQVSAFHTIRPVIHTWCYFSVHPEHTPFLRNSTCNSSTFD
ESEDWQVAQDAEICLLKSGEIMMKLPLTVEEIMNFGESNRELFIKSSTYSIIPITVTEMG
LTISWIFSSDPKSISFSIVYQESEDTPLDQCKVLIPMTRCNSHKETIRGQVKVRNAGIYT
LIFDNTFSRFISKRVFYHLAVERPVIYDGSDFP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacaagtggcgaaagccagctgcagcggattatcagagacttgcaagatgca
gtgactgaattaagtaaagaatttaaagaaggaggtgaaccgatcacagatgacagtgtc
aacttgcaaaaattctcctacaagcttgagtacctcttacagtttgaccagaaagaaaaa
aacacattgctgggaaacagaaaagactactgggattatttctgtgactgtctggcaaaa
atcaaaggagctaatgatggaatccgctttgtcaagtctattacagaactgcgaacctct
cttggaaaaggaagagcatttcttcgttattccctggttcaccaaaggctggcagacacc
ttgcagcaatgttttatgaacaccaaagtcaccagtgactggtactacgcaagaagtcca
tttctgaattccaaaatgagttctgacattgtgggtcaactctatgagctcactgatgtt
cagtttgacttggcatcacgaggctatgatttagatgctgcttggccagcatttgccagg
aggactctgtcgtcacttggatcttcagcatatttatggaagcccccaagtcgcagttcc
agcatgagcagtttagtgagcaattatttgcaggcacaagagtttccttccagccctgat
gtaaataactcactaaatgctgaacaccttgagggctacgaagagatgcgtttagaactt
gaccaggctgagctgaggcagagggaacttcaagatcgtattcaccagctagaaattgaa
aaccaggagctccaggcagctgtcagccttcaaaaggaacaagtacaggtagaaaaggag
aagagcaataactacagtgaggagaactcccggctgacaaagatgatcacagagttacag
aagcagtatgaggtctcacactccactcagagcactgtccatgacctgcagaagtgccta
cagtcactggaactgagtgcagtggagcagcagaaggaacactcaacaaaggtggagcag
ctgttgaccagcaaggaagattgtgcctcaaaattacaggtttcaaatcaggagctggag
acctctagggctttgattgctgtgaaggatctgtgcattgatgagctcaaagccaagctg
agttccacagaacagaagaacctcaacctccttgcaaaagttgatgctgccttggaggaa
aagggacagcaagccacagcccagtatgattctgccctacaaatacgggcactgttagag
aagcttcaggagatggaaaaggaaaaggcagatatgcaaagactcaatgctgaacatgca
tctcagctgaaggcagcaagggaggagctgctgctgaaagaacaggcgcagaaggaactg
gaatccagatacagtagcctcactgctaactccaaagaagagagtgaaaagctgactggg
agcctggagactatggcaaaggaaaaggatgctcttcaggaggccctgactctgaaagga
aaggagatggctgagctgcagacccaggtaatggggtcgctggctcaggtgggtttactg
gaaaaaaatcttgaggaagccaggaaagaaaaagagaaacttgaggaggagtatggtagg
agagaaggagcactgaagcaggaagcccagttacaagcagagcaacttgaactacaggag
ggtcgcttaacaaaggtgagtcagactgtgtgtagccttcaggagcaaaaccagaaactc
atgtctgagaaggagcatctcaggcagaaagtcaaggagctggaggagcagatggagcag
caaaactctgcagtgagtgaattggatgaggagagcaggaaactgaaagcagagaatgag
aatttgcaacagtctaagaagaagatggaagagaagctgaaaaatctggaagcttctaaa
gcttccctagaagctgatgtagccaggttgagagcctctgagaaacaacttcagagtgag
atagatgatgccctggtgtcagttgatgaaaaagagaagaagcttcggagtgagaacaag
cagctggatgaagacttgcagaatgccaggaggcaaagccaaattctagaggagaggctg
gaggctctgcactcagaatatgaagaactaaagcaaagagaagagacctccaaggagtct
tacgcctcacttgaagcacaaatgaagagtgccaaacagcatggtttacaaatggaaaaa
agcttggacaccttgaaggaaagcaaagagtctctccagtcacagctcacacagaaggaa
gtagaactgcagggcatggagagccaatgtcagcagctaagagcagaagctgaaagacac
aggaagagagcagagactcttgagatagaaaagctcagtgtagaaaagacatgccttcat
cagacaaaacttatagaatctctcacatcagaaaaggaatctgtggaaaaacagcaacta
cagcagtcagcatccctggagaaggaggcaaaagagctggccttcagactgaccatgagt
gaagagcagctggaggtcaacagaggtgaagtgtccaggctgcaggcagaagtccttgat
ctgcgagtcaagcttcagcaggccactgatgagagagagaggatgagaggtgagctggca
gtcactgagactgtcttgagtgagcagaagacgcttgtccagcagctgaaagagcagagt
gagtctctcaacagaaatcacgtgcaagaactggtgcaatgtaaagaaagggaagacaag
ctgaaaaaggagcaggagagaacagcccatcaaaaagctgagctggaaaataatttgatg
aacctaagggaagagctgtctaaggttaagcggtatttggaaaatgctagagtggaaaat
gaagaaaataaagatctcctccacaggaccaatactgatatggctgaacttggtattcag
atttgtgccttgacctctgaaaaggtggatgcagaagagcagttggcccaggccacagaa
aggttcaaagaactggaagaacaggcagcagagcaacaggagaagctgaaacttgacatc
tctaatctcagagaggagaacaagagcctgcaagagaaattagaggaggctcaaatgtgt
gctgcagctgtcccaagtctgcaattgcagctggagacaataaagaaacaggcacagagt
ttccaagagaccagccaagaagagctgtctgcaataaaatttcaaatgagcacagagatt
ctaaattatcagacaaaattcaaggctgccagtgaggagtgtgggaaagtaagagagcaa
cttgaggagcagaagcgacaacagcatgcagctgaggaagagattacggagttacaagct
gcaaacacgagtttgtgtagaaagctggatgaagcaagacagcagctgtcagaatcagaa
tctgctcggcttcagaaggaagaggaagtgacttctcttagagaactcttggaaaggatc
caaaaagaagctgatgaagcaaaagagaagatcctggattacactgagaagctcagcaag
gtggcagcagacaaagatagcagtgaccagaaattatttgctgagctggatgacctgaca
agaacaaagcagttccttgaagaacgtttgatagaacttatcagagataaggatgctttg
tggcagaagtctgatgctctggagttccagcagaagcttagtgcagagcagaggtggcag
ggggacacagaagtcaatcactgtctggactgccagagagagttctcatggatggtgcgc
cgacaccactgcagaatgtgtggccgcattttctgctactactgctgtaacaactacatg
gtgacaaagcctgctggaaaaaaggagcgttgctgcagagcttgctttaataagcctaga
gtctttgtggacagtacagatgactctggatccagtgccaaccaggaaggatcaccagct
tcattggaatcacctgtgtcaccacctgagagggcttttgttgcaaatgaagattctaaa
ccaccagatgatgcagcttttgatataatcactgatgaggagctgtgccaagtacaggaa
tcagactctctgcacaatgaaagtcagatggaaaaagactctctggatcaaagtgtgaca
gatctatgtgtttgctgggctaagcagctgttaggggctctgtacagcctccagtctccg
tttcaggtttctgcctttcacacaattcgccctgtaattcatacctggtgctacttcagt
gttcacccagagcatacaccttttttgagaaacagcacgtgtaattcttcaactttcgat
gaatccgaagactggcaagttgctcaagatgctgagatatgcttgttgaagtcaggagaa
attatgatgaaattaccccttacagtagaagagatcatgaattttggagaaagcaacaga
gagctgttcatcaaatccagcacctacagtatcattcccatcactgttacagagatggga
ctaacaatcagctggatcttctcatcagaccccaaaagcatatccttcagcattgtctac
caagagtccgaagacacgccactggatcagtgcaaagttcttatccctatgactcgctgc
aactctcataaggaaactatcagaggacaggtgaaagtcagaaacgctggaatctacacc
ctgatatttgacaacacattctctagatttatctcaaaaagagtgttttatcacttggct
gttgagcgacctgtcatctatgatggaagtgattttccatag
DBGET
integrated database retrieval system
