Pyrgilauda ruficollis (rufous-necked snowfinch): 121358778
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Entry
121358778 CDS
T07608
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121358778 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121358778 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121358778 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
121358778
NCBI-ProteinID:
XP_041333164
LinkDB
All DBs
Position
Unknown
AA seq
1667 aa
AA seq
DB search
MGRIRWGFLLLLLAACALLSPGLAASEKGRLRRITYVLQPGRGSSSGSRQQRPTLLGGEQ
QQQRTFNVQLNTRYGGGGGPLERTRRMSKPGSAAVQLRLGPAGQVHPNSAAHASSFAKPA
RFSPRLKAPPGPHGNSSAALPLRQKHQLPPLPGVNVCGGQCCHGWSKATGSQRCIKPNCA
PPCQNGGMCLRPQLCVCKPGTKGNSCEDTVVQDTSSPGGRSPVVPPWPIPQQAAQQSFSQ
KMQVPPKLGPVAQMAFTIKQKPPVGLTQQAQPQMIPLSSQTLMMNLHHGQTQEYVIKPKY
YPVKKVISGEQSTEGSLPLRLGQDQPASPLRLGNHTGRIKVVFTPSICKVTCTKGNCQNN
CEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNYTGKLCQIP
VQTASSPKLYHHQQQVNKAVGSQVIHSTHTLPLTMSGQQGVKVKFPPNIVNIHVKHPPEA
SVQIHQVSRIDSTSTGQKAKVPQPVHPQVSYQGLPYQKTQKGHTTYTNQQPIPHMFPVSV
KTQLGRCFQETVGTQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHGYGPMMEC
PQGYKRINATFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFVPDPTLSRCIPDNPVV
AEEKGPCYRFVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGG
MGYTVSGPHRNKLYHHPAVRVQPPAIGKTPITQPVAKGTSPPPLPAKEEPVEALTFSQKS
ETEMAVQEVATAAPDQELASIDQEKQPYLEPGQPQLSPGISTINLHPQFPVVIEKTSPPL
PVEVAPEVSTSSASQVIAPTQVTEINECTVNPDICGAGHCVNLPVGYTCICYKGYKLNDQ
QTKCIDINECDQAPHLCSLGRCENTEGSFLCICQAGFMASEDGTDCVDFDECSRPHTCGE
GFCINTLGSYRCEYCDSGYQMNRRGECEDIDECLTPTTCPDAQCLNAPGSYQCIPCRVGF
RGWNGQCHDINECQYGNHCTNGRCENTEGSFRCFCAQGFKLSASKDQCEDINECQQRSVC
TNGRCRNTEGSFRCICSQGYALSSAGDQCEDVDECLQDSNVCLRGSCINTEGSYKCTCPD
GFQQIANRGCQDINECERSDLCSPHGECLNTDGSYQCICERGFSVSADGRTCEDVDECTN
GTVCGTHGFCENMDGSYRCLCYQGYQDTQDGQGCTDVNECEMLSGVCGEALCENVDGSFL
CLCSDENQEYDPMTGQCRFRTSPEMSVEADQQEDGKKECYYNLNDANFCDNVLTSNVTKQ
ECCCTLGAGWGDNCEIFPCPVVGTAEFTDLCPEGKGFIPSGESSYGLLAQNYKDADECQL
FGQEICKNGFCLNTQPGYECYCKQGTYYDPVKLQCFDTDECQDPNSCIDGQCINTEGSYN
CFCTHPMVLDATEKRCIRPADSSEQTEEAEVYQDLCWQHLSDDFVCSRPLVGKQTTYTEC
CCLYGEAWGMQCALCPMKESEDYAQLCNIPVPGSRRPYGQDALVDFEEHYTPETNPYFVE
DRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECNELN
NRMSLCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNSEPESELE
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggatccgatggggcttcctcctcctcctcctcgctgcctgtgcgcttttgtca
ccagggctcgcagcttccgaaaagggcaggctaaggaggatcacgtacgtcctgcagccc
ggccgggggagctcctctggcagccggcagcagcgcccgaccctcctcgggggggagcag
cagcagcagcgcacgttcaatgtgcagctgaacacgcgctacggcggcggcggcggcccc
ctggagcggacccggcggatgagcaagccgggcagcgccgccgtccagctccgcttgggc
cccgccggccaggtccaccctaactccgccgctcacgcctcctccttcgccaagccggcc
cgcttcagcccgcggctcaaggcgccgccgggcccccacggcaacagcagcgccgccctg
cccctccgccagaagcaccagctgccgccgctgccgggggtcaatgtgtgcggggggcag
tgctgccacggctggagcaaggccacgggctcccagcggtgcatcaaaccgaactgtgca
ccaccgtgccaaaatggagggatgtgcctgcgacctcagctttgtgtgtgtaaaccagga
acaaaagggaactcctgtgaggatacagttgtgcaagacacatcttcccctggaggccgg
agccccgttgttcccccgtggcccataccccagcaggctgcccagcagagcttttctcag
aagatgcaggtcccaccaaagcttggccctgtggctcagatggcattcacaatcaagcag
aagcctcctgtcgggttaactcagcaagcacaaccacagatgatacccctttcatctcag
acattaatgatgaatcttcatcatggccaaacacaggaatatgtgattaagcccaaatat
tatccagtaaaaaaagtgatttcaggagagcagtccactgagggctcattaccactgagg
ctgggccaggatcaacctgcatcccctttgcgattgggaaatcacactggtcgcatcaag
gtggtctttacacccagcatctgtaaagtgacttgtaccaaaggcaactgtcagaacaac
tgtgagaagggaaatacaaccaccctcatcagtgaaaacggccatgctgctgacacgctg
acagccactaacttccgagtagttatttgccaccttccatgcatgaatggaggccagtgt
agttctagagataaatgccagtgccctcctaattacactggtaaactttgtcagattcct
gtgcagactgccagttctccaaaactctaccatcaccagcaacaggtgaacaaggctgta
ggatcacaagttatccactctactcatactttaccactgacaatgtctggacagcaaggt
gtaaaagtgaagttccctcctaacatagtgaatatccatgtgaaacatccccctgaagcc
tcagttcagatccatcaagtgtcaaggattgacagcacatcaacaggacaaaaagcgaaa
gtacctcagccagtacatccacaggtctcttaccaaggtcttccgtatcagaagacccag
aaaggacatacaacttacacaaatcaacaacccattcctcatatgtttcctgtttcagtt
aaaactcagcttgggcgctgctttcaggagactgttgggacacagtgtggcaaagctctt
cctggcctttccaagcaagaagactgctgtggaactgtgggtacttcctggggttttaac
aaatgccagaaatgtcccaagaagccgtcttatcatggatatggtcctatgatggaatgc
ccacaaggctacaagagaatcaatgctacattttgtcaagatatcaatgagtgtcagtta
cagggagtatgccctaatggtgaatgcttgaataccatgggcagctatagatgtacctgc
aaaatgggatttgttccggatcctaccctctcaagatgcatacctgataaccctgtagtt
gctgaagagaaaggaccctgctaccggtttgttagcgcaggaaagcaatgcatgcatcct
ctttctgtgcagctcagcaagcagctttgctgttgcagtgttggcaaagcctggggccca
cactgtgagaagtgtccgctcccaggaacagctgcttttaaggaaatctgccctggtgga
atgggttatacggtttctggccctcacagaaacaagctatatcatcaccctgcagttaga
gtacagccacctgccattggcaagaccccgattactcaacctgttgctaaaggtacttct
cctccacctctcccagcaaaggaagagccagtggaggcactgaccttctcacagaaaagt
gagactgagatggctgtacaagaagtggcaactgcagctcctgatcaggaattagcttcc
attgatcaagaaaagcagccttatctggagcctgggcagcctcagctttctcctggaatt
tcaacaattaacctgcatccacagtttccagtagtgattgagaaaacatcccctcctttg
cctgttgaagttgctcccgaagtctctacttcaagtgcaagtcaagttattgcacctact
caagttacagaaatcaacgaatgtacagttaatcctgatatctgtggagcaggacactgt
gttaatttgcctgtgggatacacttgcatctgctacaagggctacaaacttaatgatcag
cagacgaagtgcattgatattaatgagtgtgatcaggcaccacatctctgttcccttgga
cgctgtgaaaatacagaaggaagtttcctatgtatttgccaagctggattcatggccagt
gaagatggaactgactgcgttgattttgatgaatgttcgagacctcacacttgtggagaa
ggcttttgtataaacactcttggttcatacagatgtgaatattgtgatagtggataccaa
atgaacaggagaggggaatgtgaagacatcgatgagtgcctgactccaacgacctgtcca
gatgcacagtgccttaatgctcctggctcttaccagtgtattccttgcagagtgggcttc
agaggctggaacggacagtgccatgatataaatgaatgtcagtatggcaatcactgtaca
aatggacgttgtgaaaatacagagggatccttcaggtgtttttgtgcccagggtttcaaa
ctctctgcatcaaaggatcagtgtgaagatattaacgaatgccagcagcgatcggtctgt
acgaatggacgctgcaggaacacagagggatctttcagatgtatctgcagccaaggctac
gcattgtcatctgctggagatcagtgtgaagatgttgatgaatgccttcaagacagcaat
gtttgcctaagaggaagctgcataaatactgaagggtcttacaaatgcacttgtccagat
ggtttccagcagatagcgaataggggatgtcaagatatcaatgaatgtgagagatctgac
ctctgctcaccacacggagagtgtctaaacacggatggctcctaccagtgcatatgtgag
cggggcttttctgtgtctgcagatggccgaacatgcgaagatgtggatgaatgtacgaac
ggcacggtgtgtggcacccacgggttctgtgaaaacatggatggctcctaccgctgcctc
tgttaccaagggtaccaggacacacaggatgggcaggggtgtacagatgtgaatgaatgt
gaaatgttgagtggagtatgtggcgaagcgctctgtgaaaatgttgacggttctttcctg
tgtctgtgctctgatgagaaccaggagtacgatccaatgaccggacagtgtcgcttccgt
acctcaccagaaatgtcagtagaggctgatcaacaggaagatggaaagaaggagtgctac
tacaatctgaatgatgctaatttctgtgacaatgtgctgacgtccaatgtaaccaaacag
gaatgctgctgtaccttgggtgctggttggggtgataactgtgaaatcttcccatgccct
gtcgttggaactgctgaatttactgatttgtgtcctgaaggaaaaggtttcattccctcc
ggagaatcatcttacgggcttcttgctcagaattacaaagatgctgatgaatgccaactc
tttggacaagaaatctgtaaaaatggcttctgtttgaatacacagccaggttatgagtgc
tactgcaaacaaggcacatactatgaccctgttaagctccagtgctttgacacggatgaa
tgtcaggacccaaacagctgtattgatggccagtgcattaacacagaaggatcttacaac
tgtttctgtacacacccaatggttttggacgcaacagaaaagcgatgcatcagaccagca
gattcaagtgaacaaactgaagaagctgaggtctaccaggacctttgctggcagcacctg
agtgatgattttgtctgcagtcggccgctggttgggaagcagaccacgtacaccgagtgc
tgctgcctgtatggggaggcctggggcatgcagtgcgcgctgtgtcccatgaaggagtca
gaggattacgcccagctgtgcaacattcctgttccaggatctcgacggccatatggacag
gatgctttagttgactttgaggagcactacactccagaaaccaatccatacttcgttgaa
gaccgtttcctgaacagctttgaggagctacaagcagaggaatgtggaattctgaatgga
tgcgaaaatggccgatgtgtgagagtccaggagggctacacctgtgactgctttgatggt
tatcacctggacatggccaaaatgacctgtgttgatgtgaatgagtgcaacgagctgaac
aacaggatgtccctctgcaagaatgccaaatgcattaacacggaagggtcctacaagtgt
ttgtgtctccctgggtatgtgccttcagacaagccaaactactgcacaccactgaactca
gagccagagagtgaactggagtag
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integrated database retrieval system
