Pyrgilauda ruficollis (rufous-necked snowfinch): 121364543
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Entry
121364543 CDS
T07608
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pruf01002
]
121364543 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121364543 (USP9X)
Enzymes [BR:
pruf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121364543 (USP9X)
Peptidases and inhibitors [BR:
pruf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121364543 (USP9X)
Ubiquitin system [BR:
pruf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121364543 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
121364543
NCBI-ProteinID:
XP_041343854
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQADAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQVLHDR
FMSGSALNVQIIAALIKPFGQCFEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISEITITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCQSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggagggaatgatagccaaggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttcaaat
gagaactccccagctaccccgcctgatgagcagggccaagctgatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtattgccgaagggggaattagaagttcttctagaagct
gctattgacctaagtaaaaaaggccttgatgtcaaaagcgaagcatgccagcgatttttt
cgagatgggttaacaatatccttcacaaaaatccttacagacgaggcagtgagtggctgg
aagtttgaaattcatagatgtattattaacaacactcatagactagtggaactctgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtactcgtccctcagaaacagttcctgcaggagtc
cagctcgctgaagatgagctttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagatcttatcaacaagtttggcacattaaatggatttcaggtcttgcatgatcga
ttcatgagtggatcagcattgaatgttcaaataattgcagctctcatcaagccatttgga
caatgttttgaatttttaacattacatacagtgaagaaatacttccttccaattatagaa
atggttccacagtttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctttgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaatttagaaatatttaggttaaaaatgattctt
aggttgttacaaatttcctctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcatactatactcatcgacatggtaatcctgaagaggaagagtgg
ctcacagctgaaagaatggcagaatggatccagcagaacaacattttatcaattgtatta
agagatagtcttcatcaacctcaatatgtagaaaaacttgagaaaattctccggtttgtc
atcaaagagaaagctctcactttgcaggatcttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatctccttgcaaaattagcttgggatttc
tctcctgaacagcttgatcacctgtttgattgttttaaggcaagttggacaaatgcaagc
aagaaacagcgtgagaaactgctggagttaattcgtcgccttgcagaggatgacaaggac
ggcgtgatggcacacaaagtgctgaaccttttgtggaatttggctcacagtgatgatgtg
ccagttgatatcatggaccaggctcttagtgcccatataaaaatcttagattacagctgt
tcacaggatcgagacacacaaaagatccagtggatagatcgctttatagaagaacttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgcagtttgttt
ggtgaagcaccacagaacttgagtcaaactcagcgaagtccccacgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcacgccctcgttacactggttgcagaaaacctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcatggtgagtacgatccccag
actgtgagaccaggcagccgatacagtcacgtgcaggaggtacaggagcgactgaacttc
ttacgatttttgttgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagcagaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgacctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacatcgcaaaccgagcaatagaccttctcaaagagatctatactaatctt
ggcccaaggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttc
gatcgtctaaaagcctcctatgatacattatgtgtgttggatggagataaagacagcatc
aactgtgcaagacaagaagcaataaggatggtgagagtgttgactgttttaagggagtat
atcaatgaatgtgacagtgattaccacgaagagagaactattctacctatgtcaagagct
ttccgtggtaaacatatcacacttgtggttcgttttccaaaccaaggccggcaggtggaa
gatttggatatttggtctcacacaaacgacacgatcggccaagtgcgccgttgcatcctc
aatcgcattaaagccaacagcgcgcacacaaaagtagagctgttcattgggggtgagctg
gtagatcctgcagatgacagaaaattaattgggcagctgaatctcaaggataaaacgcta
attacagctaagcttacacagataaattctaatatgccctcaagtccagatagttcttct
gactcttcaactggttctccgggcaaccacggcaatcactacagtgatggtccaaatcca
gaagttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacttgggcagtagtctaaatatgcctcctcttagagatggagct
cgtgttcttatgaagctcatgccaccagataacactacggtcgagaaattaagagcaatt
tgtttagatcatgcaaagcttggggaaagcagccttagtccatcccttgattctctgttc
tttggtccttctgcttcacaagtgctgtacctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctgggagaagatgccagtgacttccagtacaacttcctgaaaagc
ggtggtttgcctcttgtgctgagcatgctgaccagaaataacttcctgccaaatgcagat
atggaaactcgaaggggtgcctaccttaatgctctaaaaatagccaaattattgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgtggaaggc
acgagtacaatttcaccgataaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagaatgcatgctgagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcttcaaaatacatccctgacatctgtgttatcagg
gcagtacagaaaattgtttgggcatcaggttgtggatcagttcagctggttttcagctcg
aatgaggaaattagtaaaatctatgaaaagacaaatgcaggaaatgaaccagacatggaa
gatgaacaagtttgctgtgaagcactggaggtgatgaccctgtgctttgctttgattcca
acagcactggatgcactcagtaaagagaaggcgtggcagacatttattattgatttacta
ttgcactgtcacagcaaaactgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgcatgggacagagacctctccttttcttcattaccctgctgtttactgtt
ctagggagcactgcaagagagagagctaagcattctggagactatttcaccctcttaaga
catctgcttaactatgcttacaacagtaatattaatgtacccaatgctgaagttcttctc
aataatgaaattgactggcttaagagaatcagggatgaagtaaaaagaacaggggaaaca
ggtgttgaagaaacgatcttagagggtcaccttggagtaacaaaagagttgttagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccagcatccaatgtttatctacagtacatgagaaat
ggagaattgcctgctgagcaggccataccagtctgtagttcaccagccactattaatgct
ggctttgagctcctcgttgcactagcagttggatgtgtgcgaaatctcaagcagatagta
gacacgttgactgaaatgtattacataggtacagcaatcactacttgtgaagcactcaca
gaatgggaatatctgccacctgttgggcctcggccgccaaagggatttgtggggctgaaa
aatgctggtgccacttgttacatgaattctgtcattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaatagaaggcacaggcagtgatgtagatgatgacatgtct
ggggatgaaaagcaggacaacgagagcaatgttgacccacgagatgacgtgtttggttat
ccacatcagtatgaagataaaccagcactgagcaaaactgaagatagaaaagagtacaat
attggagttttgaggcatctccaagtaatttttggccatttagcagcttccaggctacag
tactatgtaccaagagggttttggaaacagttcagactctggggtgaacctgtaaatcta
cgtgaacaacacgatgctttagaattttttaattcgttggtggacagtttagatgaagct
ttaaaagctttgggccatccagcaatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtacgagtgtgaggaatccttcacaactctg
aatgtagatataaggaatcaccaaaaccttcttgattctttggagcagtatgtcaaagga
gatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggtggataca
gtcaaacgcttgttgattaagaagttgcctccagttcttgcgatccagttaaaacgattt
gattatgactgggaaagggaatgtgcaatcaaattcaatgattattttgaatttccacga
gaactggatatggaaccttacacagtggcaggtgtagcaaaattggaaggggatgatgtg
aatcctgaaaatcagataatacaaaatgagcagtcagaaaatgaacactctggaagcaca
aaatacagacttgtgggtgtactcgtgcacagcggccaggccagtggcggacattactac
tcttacattatccagaggaatggtggagatggtgagaagaaccggtggtacaaatttgat
gatggagatgtgacagagtgtaaaatggatgacgatgaagagatgaaaaatcagtgtttt
gggggagagtacatgggcgaagtgtttgatcacatgatgaagcgaatgtcctacaggcgc
cagaagaggtggtggaatgcttacattcttttttatgaacgcatggacacgatagacaag
gacaatgaactaataaaatatatttcagaaatcactatcaccactaaaccccaccagatt
aaaatgccctcagccatcgagcgaagcgtgcgcaagcagaacgtgcagttcatgcacaat
cggatgcagtacagcctggaatatttccagttcatcaagaagttgcttacttgtaatagt
gtctacctaaaccctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggccctgctagtgattggtatgatgccctgtgcatcctgctccgtcacagc
aagaatgtacgtttttggtttgcacacaatgtcctttttaatgtttcaaaccgcttctct
gagtatctcctggaatgccccagtgcagaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagatggaccatgtcaatcaccttttgcctctcctgga
ccttccagtcaggcttatgataacttaagtttaagtgatcacttactgagggcggtactg
aatcttctgagaagggaggtatccgagcacgggcgccacttgcagcagtatttcaatctg
tttgtgatgtatgccaacctaggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggatgaaggtccaggccctccaattaagtaccag
tatgctgagctggggaagctgtacaccgtggtgtcacagctgatccgctgctgcaacgtc
tcatcgcggatgcagtcttctatcaatggtaatcccccacttgccaacccttatggtgat
cctaatttatctcaacctataatggcacttcagcagaacgtggcagacattctgtttgtg
agaactagttacgtaaagaaaattattgaagattgcagcaactctgaagagaccatcaag
ttgcttcgtttctgctgttgggagaatcctcagttctcttccacagtcctcagtgaacta
ctttggcaggttgcatattcatatacatacgagcttcgaccttatttggatctgcttctg
caaatcctgttaattgaggactcttggcaaactcacaggattcacaatgcacttaaggga
atcccagatgacagggatggactctttgacaccattcagcgctcgaagaatcattatcag
aaaagagcttaccagtgtataaagtgcatggtagctctcttcagcaactgccctgtagct
taccagatccttcagagcaatggagatttgaagagaaaatggacctgggcagtggaatgg
cttggagacgagctggagcgtagaccatacactggcaatccccagtacacctacaataat
tggtctccaccaatacagagcaatgaaacatcaaatggctacttcctagagaggtcacac
agtgctaggatgactcttgcaaaggcttgtgagctctgcccagaggaggaaccagatgat
cctgatgccccagatgaacatgagtcttctccacctgaagatgcaccactgtatccccat
tcacctggttcccagtatcaacagaataaccacgtgcatggacagccatatacgggcccg
gcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaactacgaa
ggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
