Pyrgilauda ruficollis (rufous-necked snowfinch): 121365422
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Entry
121365422 CDS
T07608
Symbol
CACNA1S
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04010
MAPK signaling pathway
pruf04020
Calcium signaling pathway
pruf04260
Cardiac muscle contraction
pruf04261
Adrenergic signaling in cardiomyocytes
pruf04270
Vascular smooth muscle contraction
pruf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121365422 (CACNA1S)
04020 Calcium signaling pathway
121365422 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121365422 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
121365422 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
121365422 (CACNA1S)
04270 Vascular smooth muscle contraction
121365422 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121365422 (CACNA1S)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121365422 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
PKD_channel
CAC1F_C
Ca_chan_IQ
DUF2919
Motif
Other DBs
NCBI-GeneID:
121365422
NCBI-ProteinID:
XP_041345527
LinkDB
All DBs
Position
Unknown
AA seq
1750 aa
AA seq
DB search
MESASPQGDVKKRQQKEKSKKPVPPIAPRPPRALFCLTLENPLRKACISIVEWKPFEIII
LLTIFANCVALAIYLPMPEDDTNIANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVTLGLITMTLEQVNVKQAGPSGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGRMHKTCYYLGTDVIATVGSE
KPAPCTSSGHGRHCSINGSECRGGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAMGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSDRARGEGMMPSDEGGSETESLYEIEGMNKWILFFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILMVALNTLSIASEHHFQPEWLTRVQDNANRLLLALFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCSGILETILVELGTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMKVRRSTFDN
FPQALISVFQILTGEDWNSIMYDGIMAFGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTLAQKAKAEERKRRKMSRGYPEKSEEEKQMLAKKLEQKVKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRVLCHRTVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGF
TSVFTVEIVLKMTTYGAFLHKGSFCRNSFNILDLLVVAVSLISMGFESSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTD
PSKLTEKECRGQFINYVDADPTQIEVQDRVWLHSDFHFNNVFSAMMSLFTVSTFEGWPEL
LYMAIDTNAEDAGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGENEYKNC
ELDKNQGWXLHHLPISELYHSIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQHY
NQSAEMNHISDILNVAFTILFTLEMVLKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVILS
EIDTILAPSGGLYCLGGGCDGTDPDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWTF
IKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRCA
TGEAWQEILLDCSYGRRCDPESDYAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAVI
MDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRINPPLGFGKFCP
HRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGTGVVQFLHLEKPTFCDSRT
GGLFGQVDSFMEPSSPLQPQVASQRPLQFTEVGSEDLDSPVFLDDFPQEGNTNINNANSS
SWLEGVHYEDEVLRKTVPAARRRPAWEYNRPIPMERLSRRRGATSGGLSSPGPLLPQQLC
ATLIQLPTEDGTVTGTASSSRFQQRETGEPGTSSTPAITFLIQEALISGGLGALAQDSSF
LAVTRDEMAASSQLEVDEVEKAAVELLKGRETLQGTKTGSAPLDTSAVAPGRSPGLGAAP
SQKTMTATRP
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgcttctccccagggtgacgtgaagaagaggcaacagaaggagaagtccaag
aagccggtaccaccaatagctcctcgtccacccagggctctgttctgcctaaccctggaa
aaccccctgcggaaggcgtgcatcagcatcgtggagtggaaacccttcgagatcatcatc
ctcctcaccatctttgccaactgtgttgctctggccatctacctgcccatgcccgaggat
gacaccaacattgccaactccagcctggagaagattgaatatgccttcctcatcttcttt
gccatcgaggccatgctgaagataattgcctacggcttccttttccacacggatgcctat
ctccgaaacggctggaatgtgctcgacttttccattgtgactctagggctcatcaccatg
accctggagcaggtcaatgtgaagcaggcagggccttcggggggaaaaggcggctttgac
gtgaaggcgctgcgagcgttccgcgtgctgagacccctgcgcctggtgtccggagtgcca
agccttcaggtcgtcctgaactccatcatcaaggccatggtgcccctgctgcacatcgcc
ctgctggtcctcttcatgatcatcatctacgccatcgtggggcaggagctcttcaagggc
aggatgcacaagacctgctactacctcgggacagatgtgattgccacggtgggctcagag
aagccagccccgtgcaccagctcgggccacgggcggcactgcagcatcaacggcagcgag
tgccgcggcggctggcccgggcccaacaacggcatcacccacttcgacaacttcggcttt
gccatgctcaccgtctaccagtgcatcaccatggagggctggactgaggtcctctactgg
gtaaatgatgccatgggaaatgaatggccctggatctactttgtcagccttatcttgctt
ggctccttctttgtactcaacctggttctgggggtgctcagtggcgagttcaccaaggag
cgcgagaaggccaagtcgcggggaacgttccagaagctgcgggagaagcagcagctggag
gaggatctgaagggctacatggactggatcacccacgcagaggtcatggacagtgatcgg
gccaggggagaaggtatgatgccatcggatgaaggagggtcagagacagagagcttgtat
gaaattgagggcatgaacaagtggattctcttcttccgtcagtggaggcgttggaaccga
atgtttcgtaggaagtgcagggatgtggtgaagtccaagttcttctactggcttgtcatc
ctgatggtggcactgaacaccctctccatcgcctccgagcaccacttccagccagagtgg
ctgacacgggtgcaagacaatgccaaccggctgctgctcgccctctttgtggccgagatg
ctgctgaagatgtacgcgctggggctgcgccagtacttcatgtcgctcttcaaccgcttc
gactgcttcgtggtgtgctcgggcatcctggagaccatcctggtggagctgggcaccctg
tcccccctgggcatctccgtgctgcgctgcatccgcctcctgcgcatcttcaagatcacc
aggtactggacatctttgagcaacctggtggcctccctgctcaactcagtccgctccatt
gcctctctgctcctcctcctcttcctcttcatcatagtttttgccctgctgggcatgcag
ctcttcgggggcaagtttgatttcgaggacatgaaagtgcggcgcagcacgtttgacaac
tttcctcaggccctcatcagtgtcttccagatcctgaccggagaggactggaattcaatc
atgtacgacgggatcatggccttcgggggcccgtcctttcctggcatgctggtctgcatc
tacttcatcatcctctttgtctgtgggaactatatcctcctcaatgtgttcctggccatc
gcagtcgacaacctggccgaggctgagagcctgaccttagcccagaaggccaaagcagag
gagcgcaaacggcggaagatgtccagaggttacccagagaagtctgaagaggagaagcag
atgctggcaaagaaactggagcagaaagtgaagggagaagggattcccacaacagccaag
ttgaaagtggatgaatttgaatccaatgtcaatgagatcaaagacccctacccttctgca
gacttcccaggtgatgatgaggaagatgagcctgaaatccccttgagtcctcggccacgt
ccccttgcagagctacagctgaaggagaaggccgtgcccatgcctgaggccagctcattc
ttcatcttcagcccaaccaacaagtttcgggtcctgtgccacagaactgttaatgccacc
tggttcaccaacttcatcctgctcttcatcctgctcagcagcatttccctggcagctgag
gatcccatccgggccgagtccttccgcaaccagattcttggatactttgacattggtttc
acctctgtcttcacagttgaaatcgtcttgaagatgacaacctacggtgctttcctgcac
aaaggctccttctgcaggaactccttcaatatccttgacttactggtggtcgccgtctcc
ctcatctccatgggatttgagtccagcacgatctctgtggtgaagatcctgcgggtgctg
agggtgctgaggcctctgcgagccattaacagggcaaaggggctgaagcacgtggtccag
tgcgtgttcgtggccatcaagaccattggtaacatcgtggttgtcacgacattgctgcag
ttcatgtttgcctgcatcggcgttcagctcttcaagggcaagttctacaggtgcacagac
ccatccaagctgacggagaaggagtgcaggggtcagttcatcaactacgtggacgcagac
cccacgcagattgaggtccaggaccgagtctggctgcacagcgacttccacttcaacaac
gtcttctcagccatgatgtcgcttttcaccgtctccaccttcgagggctggccagagctg
ctgtacatggccattgacaccaatgctgaggatgcaggccctatctacaactaccgggtg
gagattgcaatgttcttcatcatctacatcatcctcattgccttcttcatgatgaacatc
tttgtgggctttgtcatcgtcaccttccaggagcaaggagagaatgagtacaagaactgt
gagctggacaagaatcagggatggtgactccaccacctccccatttcagaactttatcac
tccatccccaagaacccctaccagtaccagatctggtacgtggtcacctcctcctacttc
gagtacctcatgttcttcctgatcctgctgaacaccatctgcctgggcatgcagcattac
aaccagtctgcagaaatgaaccacatctcagacatcctcaacgtggccttcaccatcctc
ttcaccctggagatggtcctcaagctcatggccttcaaagccaagggctacttcggagac
ccctggaatgtctttgacttcctcatagtgattggcagcatcattgatgtcatcctcagt
gagattgataccatcctggcacccagtggtggattgtactgcctcggtgggggctgtgat
ggcactgaccctgatgacaactcccgcgtctccatcacttttttccggctattccgagtg
atgaggctggtgaagctgctgagccggggggaaggtgtcaggaccctcctgtggaccttc
atcaagtcctttcaggctctgccctatgtggccctgctgattgtgatgcttttcttcatc
tatgccgtgattgggatgcagatgtttgggaagattgccatggtggatgggacccagatc
aaccgaaacaacaacttccagacctttccacaggctgtgctgctgctcttcaggtgtgcc
accggcgaggcgtggcaggagatcctgctggactgcagctacggccggcgctgcgacccc
gagtccgactacgccgagggagaggagtacacctgtggcactggctttgcctacttttac
ttcatcagcttctacatgctttgtgccttcctgatcattaacctcttcgtggctgtcatc
atggacaactttgactacctgacacgggactggtccatcctggggccccatcacctggac
gagttcaagcggatctgggccgagtacgaccctgaggccaaggggagaatcaaacacttg
gatgtggtgactctgctgaggcgtatcaaccctcccctgggctttggcaagttctgccca
caccgtgtagcttgtaagcgcctggtgtgcatgaacatgcccctgaacagcgacggcacc
gtcaccttcaacgccaccctctttgctctggtgaggacagccctcaagatcaagacagaa
ggaacaggtgtggtgcagttccttcacttagagaagcccactttctgtgactcgagaaca
ggtggcttgtttggccaggtggacagcttcatggagcccagcagcccgctgcagccccag
gtggccagccagaggcccctgcagttcaccgaggtgggcagtgaggacctcgactctcct
gtgttccttgatgacttcccccaggaaggcaacaccaacatcaacaacgccaacagcagc
agctggctggagggggtgcactatgaggatgaggtgctgaggaagacagtgccagcagca
cgcaggcgcccggcgtgggagtacaaccgccccatacccatggagaggctgagcaggagg
cgaggggccacctctgggggtctctcatcaccagggccactccttccccagcagctctgt
gctactctcatccagctgcccacagaggatggcactgtgacaggaactgcatccagctcc
aggttccagcagagggaaactggtgagccaggaacatcctccaccccagccatcaccttc
ctcattcaggaggctctgatctccggaggcctcggggctctggcccaggactcgtcgttc
ctagcagtgaccagggatgagatggcagccagcagccagctggaggtggatgaagtggag
aaagcagctgtggagctgctaaagggaagagaaacactgcaggggacaaaaactggctct
gcccctctggacacctcagctgtggcaccaggcagatccccagggctcggtgcagctccc
tcccaaaagaccatgactgccactcgcccctga
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