Propioniciclava coleopterorum: G7070_14670
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Entry
G7070_14670 CDS
T06483
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
prv
Propioniciclava coleopterorum
Pathway
prv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
prv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
G7070_14670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prv03400
]
G7070_14670
Enzymes [BR:
prv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
G7070_14670
DNA repair and recombination proteins [BR:
prv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
G7070_14670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
YugN
Motif
Other DBs
NCBI-ProteinID:
QIK73274
UniProt:
A0A6G7Y8Q5
LinkDB
All DBs
Position
complement(3082599..3083519)
Genome browser
AA seq
306 aa
AA seq
DB search
MADVVTEVDGRTLKLSNLDKVLYPSGFTKGEVIEYYHGIAPVMLPHLAGRTVTRIRFPNG
TKAPSFFEKNVPAGAPPWLVRHTVDGSEGPVLYPIVDGVPALVYLANLAALELHTPQWHT
DDPGTPTTLSPELPVDQLVIDLDPGAGVTMPLIATAALLIAGELGDAGLVAHVKTSGSKG
LQLYAPLVPTPAGRVLEWVHGLADALVARHPDLFVTAIAKEARAGRILIDINQNLPGRTT
VTAYSLRARDEPTVATPVTWDEVEAAAEGAPLSFTAPQVLARVAELGDLFAPLLDGRRGT
LPDAAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtcgtgaccgaggtggacgggcggacgctcaagctgtccaacctcgacaag
gtgctctacccgtccggcttcaccaagggcgaggtgatcgagtactaccacggcatcgcg
ccggtgatgctgccgcacctggccgggcgcaccgtgacccggatccggttccccaacggg
acgaaggcaccctcgttcttcgagaagaacgtgcccgcgggcgccccgccctggctggtg
cgtcacacggtggacggctcggaagggcccgtcctctatccgatcgtcgacggcgtgccc
gcgctggtgtacctggccaacctcgccgccctggaactccacaccccgcagtggcacacc
gacgatccggggacgccgaccacgctgtcgcccgagcttccggtcgatcagctggtcatc
gacctcgatcccggcgccggcgtcaccatgccgctcatcgcgaccgcggcgctgctgatc
gccggcgaactgggcgacgcgggcctggtggcccacgtcaagacctcgggcagcaagggg
ctgcagctgtacgcgcccctcgtgccgacccccgcaggccgcgtcctggagtgggtgcac
gggctcgccgacgcgctcgtcgcacggcaccccgacctgttcgtgacggccatcgccaag
gaggcgcgcgcgggcaggatcctcatcgacatcaaccagaacctccccggacgcaccacc
gtcaccgcctactcgctgcgcgcccgcgacgagcccacggtcgcgacccccgtcacgtgg
gacgaggtggaggccgccgccgagggcgccccgctgagcttcaccgccccgcaggtgctc
gcgcgcgtggccgagctcggcgacctgttcgccccgctgctggacggccgacgcggcacc
ctccccgacgccgccggctga
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