Pseudomonas rhodesiae: HRH33_07105
Help
Entry
HRH33_07105 CDS
T07097
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx00300
Lysine biosynthesis
prx01100
Metabolic pathways
prx01120
Microbial metabolism in diverse environments
prx01230
Biosynthesis of amino acids
Module
prx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HRH33_07105 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prx01002
]
HRH33_07105 (dapE)
Enzymes [BR:
prx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HRH33_07105 (dapE)
Peptidases and inhibitors [BR:
prx01002
]
Metallo peptidases
Family M20
HRH33_07105 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QKJ72346
LinkDB
All DBs
Position
complement(1587943..1589094)
Genome browser
AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLAIDLIRRPSVTPIDADCQKLMMQRLGDAGFKLEPMRIEDVDNFWATH
GKHEGPVLCFAGHTDVVPTGPVQAWQNDPFDALIDENGMLCGRGAADMKGSLAAMLVASE
RFVADYPDHKGSVAFLITSDEEGPAHHGTKAVIERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGATLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQ
ISNLNSGTGATNVIPGELTAVFNFRFSTESTVEGLQQRVAQILDKHGLDWHVDWALSGLP
FLTEPGALLDAVSASIKAVTGRETQASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RILASDLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccatgccgacctttcgcccacccttcaacttgccatcgacctgatccgccgc
ccctcggtgacgccgatcgacgccgattgccagaagctgatgatgcagcgcctgggcgac
gccggcttcaaacttgagccgatgcgcatcgaagacgtggacaatttctgggccacccac
ggtaagcatgaaggcccggtgctgtgcttcgccggccataccgacgtggtcccgaccggc
ccggtgcaggcctggcagaacgacccgttcgacgccttgatcgacgaaaacggcatgctc
tgcgggcgtggcgcagccgacatgaaaggcagcctggcggcgatgttggtagcgtcggag
cgcttcgtcgccgactacccggaccacaagggctcggtggcgttcctgatcaccagcgat
gaagaaggcccggcacaccacggtactaaagccgtgatcgaacgcctggcagcgcgcaag
gagcgcctggactggtgcatcgtcggcgagccgtcgagcaccacgctggtcggcgatgtg
gtcaaaaacggccgccgcggctccctcggcgcgaccctgaccgtacgcggcgtgcaaggc
cacgtggcctacccgcacctggcgaagaacccgatccacctggccgcaccggccctggcc
gaactggccgccgagcattgggacgacggcaacgcgtttttcccgcctaccagtttccag
atttccaacctcaattccggcaccggcgccaccaacgtgattcccggcgagctgacggcg
gtgttcaatttccgtttctccaccgagtccaccgtggagggtctgcagcaacgcgttgcg
cagattctcgacaagcacggcctggactggcacgtggactgggcgctgtccggcctgccg
ttcctgaccgaaccgggtgccctgctcgatgccgtatcggccagcatcaaggcggtcacc
ggtcgcgagacccaggcgtccaccagcggcggcacttccgatggccgcttcattgcgacc
ctcggcacccaagtggtcgagctggggccggtcaacgcgaccatccaccaggtcaatgag
cgcatcctggccagcgacctcgatgtgctgaccgaaatctattatcagaccctgatcaag
ttgctcgcctga
DBGET
integrated database retrieval system
