Pseudomonas rhodesiae: HRH33_18845
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Entry
HRH33_18845 CDS
T07097
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
prx
Pseudomonas rhodesiae
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prx03000
]
HRH33_18845
Transcription factors [BR:
prx03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HRH33_18845
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
HTH_24
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QKJ74542
LinkDB
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Position
4173192..4174088
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AA seq
298 aa
AA seq
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MKNSIQHIQAFLTVARTGSFTKAASELNLSPSALTVQVQQLEEWLGIALLDRSPRHVSLT
PAGQEARGPMEKLLLDLDNIVTGSRDLAALRRGVVTIAALPSVCAGSLPPALRLFRERFA
GIDVRLHDVVAHRIHAQVRAGDVDFGIGVRARLSHGLDFVPVLNDRLCAFVPLDHPFAAL
PRLSLEQLADQPIILTGRDSSVREQVDALFDQTRLSMTAGMEANYMSTVLALVRQGLGIS
VLPESAADSLEGLQRIAIDHPGVSREIGLISRSGTTLSPAAQRCFDLLSDELSDTSSN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattcgatccagcatatccaagcgtttctcaccgtcgcgcgcaccggcagcttt
accaaggccgccagcgaactgaacctctcgccgtcggcgctcaccgtgcaagtgcagcaa
ttggaagagtggctgggcatcgccctgctcgaccgcagcccgcgccacgtcagcctcacc
cccgccggccaggaagctcgcggcccgatggaaaaactgctgctggacctggataacatt
gtcaccggctcgcgcgacctcgccgcgttgcgccggggcgtggtcaccattgccgccctg
ccctcggtgtgcgccggtagcctgcccccggcgctgcgtctgttccgcgagcgctttgcc
gggatcgatgtgcgtctgcacgacgtggtggcccatcgcattcatgcccaggtgcgcgcc
ggcgacgtggactttggcatcggcgtgcgggcgcgcttaagccatggcctggatttcgtg
ccggtgctcaatgaccgcctgtgtgcgtttgtgccgctggatcatcccttcgcggctttg
ccacgcttgtccctggagcaactggcggaccagccgatcatcctcaccggccgtgacagc
agtgtgcgcgagcaggtggacgcgctgttcgaccagacgcggctgagcatgacggccggc
atggaggctaactacatgtcgacggtgctggccttggtgcgtcagggattggggatcagt
gtgttgccggaatcggcggcagatagtttggaggggttacagcggatcgccatcgatcat
cccggggtaagccgggagatcggcctgatcagtcgcagcggcacaacgctgagcccggcg
gcgcagcgctgtttcgacctgctgagcgatgagttatctgacacctcatcgaactga
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