Pseudomonas salmasensis: HU731_011225
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Entry
HU731_011225 CDS
T07619
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU731_011225 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psam03400
]
HU731_011225 (recD)
Enzymes [BR:
psam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU731_011225 (recD)
DNA repair and recombination proteins [BR:
psam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU731_011225 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
SH3_13
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
AAA_28
T2SSE
NTPase_1
NACHT
Mg_chelatase
AAA_5
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QXH80331
UniProt:
A0AA92MZP5
LinkDB
All DBs
Position
complement(2539247..2541316)
Genome browser
AA seq
689 aa
AA seq
DB search
MSLSPLPLEALLPLDRAADLLQLLARWVERGWLRALDKAFVGFLYELDPNADPLVLLAAA
LTSHQLGHGHVCLDVFETLKAPDFALSLPPEGDLHTGAMLLPSQLLHGLDGGHWCHALAS
SPMVALSVDGSEEARSRPLVLSGKRLYLRRYWAYERRIDRALRLRLASVEDAAADLPQRL
NRLFDQPAPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVESGSP
LRIRLAAPTGKAAARLTESISQQVLSLTVPDSVREKIPTQVTTVHRLLGSRPGTRHFRHH
LGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGWYSPQTRHWLQAVSGEDLSTSGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARQLLAAGRHDDLFCVSLKGEHDHALERLVLDGQGDGAQGYRYYLNLLQS
ARPSADTPRDDPAWTAWAQQLLHAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPHVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELDHPSEKND
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgccgttaccgctggaggcgcttttgccgcttgatcgcgccgccgacctg
ctgcagttgcttgcacgttgggtcgagcggggttggctgcgggccttggacaaagccttc
gtcggcttcctgtacgagctggacccaaacgccgatccgctggtgttgctggcggcggcc
ttgaccagccatcaattgggccatggccacgtctgcctggatgtgttcgaaaccctcaag
gcgccggatttcgccctgtcactgccacccgaaggcgacctgcacaccggcgccatgctg
ctaccctcgcagttgctgcacggcctggatggcggccattggtgccatgctctggcttca
agcccgatggtcgcgctgtccgtcgatggcagcgaggaggcccgcagccgtccgttggtg
ttgtccggcaagcgcctgtacctgcgccgttactgggcctacgagcggcgtatcgaccgc
gccctgcgcctgcgccttgccagcgtggaagacgccgccgccgatctgccgcaacggctc
aatcgcctgttcgaccaaccggcgcccgatggggtgattgactggcaaaagctcgcctgc
gccctggcgacccgcggcgccttcagtatcgtcaccggcggccccggtaccggcaagacc
accaccgtggtgcgcctgctcgcgctgttgcaggcgcccgccgtggaatccggcagcccg
ttgcgcatccgcctggccgcgcccaccggtaaagctgctgcccgcctgaccgaatccatc
agccagcaagtgctgtcactgacagtgcccgacagcgtgcgggaaaaaatcccgacccag
gtcaccacggtccaccgcttattgggcagccgcccgggcacccggcacttccgtcatcac
ctgggtaaccccttgcccttggatgtgctggtggtggatgaagcctcgatgatcgacctg
gaaatgatggccaacctgctcgacgccttgccgccccatgcacgcttggtattgctgggc
gacaaagaccaactggcctcggtagaagcgggggccgtacttggcgatttgtgccgcgat
gccgaagccggctggtacagcccgcagactcgccactggctgcaagccgtcagcggtgaa
gacctgagcaccagcggcctgcaagaagacctcgatggcagccatcccctggcccagcaa
gtagtgatgctgcgctattcgcgccgcttcggtgagggcagcggcattggtcaactggcg
cgttgggtcaaccagcaaaacgccgaagaggcccgccagctgctagccgcaggccgccac
gacgacctgttctgcgtcagcctcaagggcgaacatgaccacgcccttgagcgcctggta
ttggacgggcagggcgatggcgcccagggttaccgctactacctgaacctgctgcaatcg
gcgcgtccttctgccgacacaccgcgtgacgacccagcctggaccgcttgggcgcaacaa
ttgctgcacgccttcgacgcgtttcagctgctgtgcgcggtgcgcaaaggcccctggggc
gtcgaagggctcaacctgcgaatcactgccgcgttgcgcaaggtacgcctgatcgaaggt
gacgagcagtggtacgaaggccgcccggtgctgatgacccgcaacgactacggcctgggc
ctgatgaacggcgacatcggcatcgcgctgaaattgcccgaaagcgacggcggcccccac
gtgctgcgggtggcttttccacgtaacgatggccagggcggcgtgcgctttgtattgccc
agccgcttgaatgatgtggaaaccgtgtacgccatgaccgtgcacaaatcccagggctcg
gagttcactcacaccgcgctgatcctgccggatgccctcaacccggtgctgaccaaagag
ctgatctataccggcatcacccgcgccaagcgctggttcagcctgatcgagccgcgcggc
ggcgtgtttgaggaagcggtgcggcgcaaggtcaagcgtctgagtgggttgatgttggag
ttggaccatccgtctgaaaaaaatgactga
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