Pisum sativum (pea): 127106821
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Entry
127106821 CDS
T08598
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03082
ATP-dependent chromatin remodeling
psat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127106821
03083 Polycomb repressive complex
127106821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psat03036
]
127106821
Enzymes [BR:
psat01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127106821
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
127106821
HDAC complexes
Sin3A-HDAC complex
127106821
BRAF-HDAC complex
127106821
REST complex
127106821
SHIP complex
127106821
MiDAC complex
127106821
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
127106821
Heterochromatin formation proteins
Other heterochromatin formation proteins
127106821
Chromatin remodeling factors
NuRD complex
127106821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
127106821
NCBI-ProteinID:
XP_050900070
LinkDB
All DBs
Position
7:complement(305983997..305992142)
Genome browser
AA seq
429 aa
AA seq
DB search
MRSKDRIAYFYDGDAGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSTDYVEFLHRITPDTQHLFSDELAKYNLGEDCPVFDNLFEFCQIYAGGTIDAACRL
NNHLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKCHSRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKT
IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNEIPENDYIKYFGPDFSLKIPNGHIENLNSKSYLSTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFNEDLQNPDERIDQHTQDKHIQRDDEYYEGD
NDNDHQTDL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccaaagacagaatcgcttacttttatgacggtgatgcgggcagtgtttacttt
gggccgaaccatcccatgaagcctcaccgcctttgcatgactcaccatcttgttctctct
tatgatcttcataagaagatggaaatttatcgcccacacaaagcttatcctgttgagctt
gcccagtttcattccactgattatgttgagtttttgcacaggatcacacctgacactcag
cacttgttctcagatgaactggccaaatataatctcggagaagactgccctgtatttgac
aacttatttgaattttgtcagatttatgctggtggaactatagatgctgcatgtcgactg
aataaccatttgtgtgatattgctataaactgggccggtggactacatcatgccaagaaa
tgtgaagcctctggattttgctacatcaatgacttggttttagggatcttagagcttctt
aaatgtcattcccgtgttttatatattgatatagatgtgcaccatggagatggtgtagaa
gaagccttctactttactgacagggtgatgactgtcagttttcacaagtatggagatatg
ttctttccaggaactggtgatgctaaggaaataggagaaagagaagggaagttttatgca
ataaatgtcccactcaaggatggaattgatgactctagcttcactagacttttcaagact
attatttccaaagtagttgaaacatatcaacccggtgcaatagttctccagtgtggagca
gattcacttgctggagatcgcttgggttgcttcaatctctctattgatggccatgctgaa
tgtgttagattcgtgaagaaatttaatttgcccttactggtcactggaggtgggggatac
acaaaagaaaatgttgctcgatgttgggcagttgaaactggagttcttctagatacagag
cttccaaatgagattccagagaatgattatatcaaatattttggaccagacttctcattg
aagattccaaatgggcacatagaaaatttaaacagcaaatcatatcttagcactataaaa
atgcaagtcttggagaatctacgctgcatacaacatgctccaagtgtgcaaatgcaagag
gtcccgcctgacttctacattccagatttcaatgaagatttgcagaaccctgatgagcgc
attgatcagcacactcaagacaagcacattcagcgggatgatgaatattatgaaggtgac
aacgacaatgatcatcaaacagatctttga
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