KEGG   Pisum sativum (pea): 127106821
Entry
127106821         CDS       T08598                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
psat  Pisum sativum (pea)
Pathway
psat03082  ATP-dependent chromatin remodeling
psat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127106821
   03083 Polycomb repressive complex
    127106821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psat03036]
    127106821
Enzymes [BR:psat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127106821
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127106821
   HDAC complexes
    Sin3A-HDAC complex
     127106821
    BRAF-HDAC complex
     127106821
    REST complex
     127106821
    SHIP complex
     127106821
    MiDAC complex
     127106821
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127106821
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127106821
  Chromatin remodeling factors
   NuRD complex
    127106821
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127106821
NCBI-ProteinID: XP_050900070
LinkDB
Position
7:complement(305983997..305992142)
AA seq 429 aa
MRSKDRIAYFYDGDAGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSTDYVEFLHRITPDTQHLFSDELAKYNLGEDCPVFDNLFEFCQIYAGGTIDAACRL
NNHLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKCHSRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKT
IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNEIPENDYIKYFGPDFSLKIPNGHIENLNSKSYLSTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFNEDLQNPDERIDQHTQDKHIQRDDEYYEGD
NDNDHQTDL
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcgttccaaagacagaatcgcttacttttatgacggtgatgcgggcagtgtttacttt
gggccgaaccatcccatgaagcctcaccgcctttgcatgactcaccatcttgttctctct
tatgatcttcataagaagatggaaatttatcgcccacacaaagcttatcctgttgagctt
gcccagtttcattccactgattatgttgagtttttgcacaggatcacacctgacactcag
cacttgttctcagatgaactggccaaatataatctcggagaagactgccctgtatttgac
aacttatttgaattttgtcagatttatgctggtggaactatagatgctgcatgtcgactg
aataaccatttgtgtgatattgctataaactgggccggtggactacatcatgccaagaaa
tgtgaagcctctggattttgctacatcaatgacttggttttagggatcttagagcttctt
aaatgtcattcccgtgttttatatattgatatagatgtgcaccatggagatggtgtagaa
gaagccttctactttactgacagggtgatgactgtcagttttcacaagtatggagatatg
ttctttccaggaactggtgatgctaaggaaataggagaaagagaagggaagttttatgca
ataaatgtcccactcaaggatggaattgatgactctagcttcactagacttttcaagact
attatttccaaagtagttgaaacatatcaacccggtgcaatagttctccagtgtggagca
gattcacttgctggagatcgcttgggttgcttcaatctctctattgatggccatgctgaa
tgtgttagattcgtgaagaaatttaatttgcccttactggtcactggaggtgggggatac
acaaaagaaaatgttgctcgatgttgggcagttgaaactggagttcttctagatacagag
cttccaaatgagattccagagaatgattatatcaaatattttggaccagacttctcattg
aagattccaaatgggcacatagaaaatttaaacagcaaatcatatcttagcactataaaa
atgcaagtcttggagaatctacgctgcatacaacatgctccaagtgtgcaaatgcaagag
gtcccgcctgacttctacattccagatttcaatgaagatttgcagaaccctgatgagcgc
attgatcagcacactcaagacaagcacattcagcgggatgatgaatattatgaaggtgac
aacgacaatgatcatcaaacagatctttga

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