Pseudomonas savastanoi pv. savastanoi: PSA3335_06055
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Entry
PSA3335_06055 CDS
T07948
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSA3335_06055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_06055
Enzymes [BR:
psav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSA3335_06055
DNA repair and recombination proteins [BR:
psav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSA3335_06055
Prokaryotic type
PSA3335_06055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARD10671
LinkDB
All DBs
Position
1316098..1316790
Genome browser
AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPSWKEALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLN
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGIEPIDWRLPVL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgacgaccgcatcaagcttgagcccagctggaaggaagcgctgcgcgatgaa
ttcgagcagccctatatggcgcagttgcgcgagtttctgcgccaggagcatgccgcgggt
aaagagatctatccgcctgggccgctgattttcaatgcgctgaattcgacgccgctcaac
aatgtgaaagtggtgatcctcggtcaggacccgtatcacggtccgaatcaggctcacggt
ctgtgtttctcggtgcagccaggcgtgccgacgccgccgtcactggtcaatatctataaa
gaactcaaacgcgacctgaatatcgacattcccaatcacggctgcctgcaatcatgggct
gatcagggcgtgctgttgcttaacacgactcttaccgtcgagcgcgccaacgcagcttcg
catgcgggaaaaggctggcagcacttcacggaccggatcattcaagtggtcagcgagcat
cagccgcatctggtgttcctgctgtggggcgctcatgcgcagagtaagcagaaactggtc
gatgcgaccaagcacctggtgctgacctccgtccatccttcgccgttgtcagcctacaaa
ggcttcctgggtaacgggcatttcgggcgtgccaacaagtaccttgagcaaaacggcatc
gagccaatcgactggcgcttgcccgttctctga
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