Pseudomonas savastanoi pv. savastanoi: PSA3335_23840
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Entry
PSA3335_23840 CDS
T07948
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav00550
Peptidoglycan biosynthesis
psav01100
Metabolic pathways
psav01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSA3335_23840
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSA3335_23840
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psav01011
]
PSA3335_23840
Enzymes [BR:
psav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSA3335_23840
Peptidoglycan biosynthesis and degradation proteins [BR:
psav01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PSA3335_23840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ARD13811
LinkDB
All DBs
Position
complement(5190084..5191979)
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AA seq
631 aa
AA seq
DB search
MSQPIRLKDHEKDARLVRGRVVFGAVAVVLLVCVLIARLYYLQVIQYEYHSTLSENNRVH
VQPIPPSRGLIYDRNGVVVADNRPSFSLSMTRERAGEWSSVLDTIVEILQLTPDDRIIFE
KRMKQGRRPFEPVPILFELSEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKSLDPINYSGTHHIGKTGIERFYEPDLHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDINLQEAAEAALGGRRGAVVALDPATGEVLAMVSAPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDAGAVTPGSRVFDPGYYQLPNY
DHKYRNWNRTGDGWVDLDTAIMRSNDTYFYDLAHKLGIDRLSTYMNKFGIGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGVWNRPHL
ARTIEGKAPVDENPMPNIVLRDPANWGRVNHGMQEVMHGARGTARKAAIGAQYRIAGKSG
TAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADNPKIVVAVMVENGESGSGVAAPVAR
QVMDAWLLDENGHLKPEYAGSLNLEAAAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccgatccgcctcaaagaccacgaaaaggacgcacgcctggtgcgcggcagg
gtcgtgttcggtgccgtggcggtggtgttgctggtgtgcgtgctgattgcccggttgtat
tacctgcaggtcatccagtacgagtatcactccacactttccgaaaacaaccgcgttcac
gttcagccgattccgcccagccgtgggctgatatacgaccgtaatggcgtggtggttgcg
gacaaccggcccagtttcagtctcagcatgacccgtgagcgtgccggcgagtggtccagt
gtgctcgacaccattgtcgagatcctccagctcaccccggatgatcgcatcatcttcgaa
aagcgtatgaagcaggggcgtcggccgttcgagccggtgcctatcctgttcgagctgagc
gaagagcagatcgccctgattgcggtcaaccagttccgcctgccgggtgtcgaagtggtt
gcgcaactggtcaggcactacccgcaagggccgcattttgctcactcggtcggttacatg
gggcggatcaacgaaaaagagctcaagagcctcgatccgatcaattacagcggcacgcac
catatcggcaagaccggtatcgagcgattttacgaacccgatctgcatggtcaggtcggc
tacgaagaggtcgagaccaacgcccgtggccgcgtgctgcgcgtgctcaaacgcaccgac
ccgatccctggaaaggacatcgttcttagtctggacatcaaccttcaggaagctgccgag
gccgcactgggtgggcgtcgtggcgcggtagtcgcgctggacccggccaccggagaagtg
ctggcgatggtcagcgcgccgagtttcgatccgaacctgtttgtcaccggtatcagcttc
aaggcctacgccgagctgcgcgattccatcgaccggccgctgttcaaccgcattctgcgc
ggcctttacccgcccggttcgaccatcaagcctgccgtggcgattgccgggctggacgcc
ggtgcggtaacgcccggctcaagagtgttcgacccagggtattaccagctgcccaattac
gatcacaagtaccgtaactggaaccgcaccggcgatggctgggtggatctggacaccgcg
atcatgcgttccaatgacacgtacttctacgatctggcgcacaaattgggcattgatcgg
ctttccacctacatgaacaagttcggcatcgggcagaaagtgtcgctggatatgttcgag
gaatcccccggtctgatgccgtcccgtgaatggaagcgtgcgacccgtcgccaggcctgg
ttccctggcgaaaccctgattctcggcattgggcagggctacatgcaggcaacgccgttg
caactggcccaggcgaccgcactggtggccaacaaaggtgtgtggaaccgtccgcatctg
gcaagaaccatcgaaggcaaggcacctgtggatgaaaacccgatgccgaacatcgtactg
cgtgatccggccaactgggggcgagtcaaccacggtatgcaggaagtgatgcatggcgcg
cgtggtacggcgcgcaaggctgccatcggtgcgcaataccggatcgcgggcaagagcggt
acggctcaggttgtcgccatcaagcagggcgagaaatacgaccgcaccaaggttcaggag
cgtcaccgtgaccacgctctgtttgtcggctttgcaccggccgacaatccaaaaatcgtt
gttgcagtgatggtcgagaacggcgagtccggttccggcgttgctgcacccgttgcgcgt
caggtgatggacgcctggctgctcgacgaaaacggccatctcaagcctgagtatgccggt
tccctgaatctggaggctgcggcccgtgaagagtaa
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