Pseudomonas syringae pv. syringae B728a: Psyr_3919
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Entry
Psyr_3919 CDS
T00246
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00470
D-Amino acid metabolism
psb00550
Peptidoglycan biosynthesis
psb01100
Metabolic pathways
psb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Psyr_3919
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Psyr_3919
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Psyr_3919
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psb01011
]
Psyr_3919
Enzymes [BR:
psb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Psyr_3919
Peptidoglycan biosynthesis and degradation proteins [BR:
psb01011
]
Precursor biosynthesis
Amino acid ligase
Psyr_3919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
AAY38949
UniProt:
Q4ZPH3
LinkDB
All DBs
Position
complement(4661904..4662995)
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AA seq
363 aa
AA seq
DB search
MKKSVAIVFGGQSSEHEVSLQSARNVINAIDRERYALTLIGVDKLGRWLHFDEADYLLNA
TDPARIKLSASGKPLSLLPGSIGGQFVDVESGQPLAAIDVVFPLIHGAFGEDGALQGLLR
MLSVPFVGADVLSSAACMDKDVTKRLLRDAGIAVAPFRVLSRGESLSFTEAADQLGLPMF
VKPANQGSSVGVSKVSDEAGFAAALALGFEFDHKLLIEQGIVGREVECAVLGNFDAQVSV
CGEVIANDEFYAYDTKYLNGDQARIAIPAELPADLSDQVRDVALQAYKVLGCAGLSRVDF
FVTEGRDIIINEVNTLPGFTSISMYPKLWQASGLSYAELIHRLIVLALERADQARLLKTE
IFP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagtcagtcgccatcgtttttggtgggcaatccagcgagcatgaggtttcgttg
cagtcggcacgcaacgtgatcaatgcgattgatcgtgaacgctatgcactgaccctgatc
ggcgtcgacaagctgggccgctggctgcatttcgacgaagccgattacctgcttaatgcc
actgatcctgcacggatcaaactaagcgcatcaggcaagccattgtccttgctgccgggc
agtatcggcgggcagtttgtcgacgtcgagtcaggccagccactggcagccatcgatgtg
gtattcccgctgatccacggcgcttttggtgaagacggcgcgttgcagggtctgctgcgc
atgctgtccgtgccttttgtcggcgccgatgtgctgtcctctgcggcctgcatggacaag
gacgtgaccaagcgtctgctgcgcgatgcgggcattgccgtcgcgccgttcagggtcctg
tcgcgtggagagagcctttctttcacggaggctgccgaccagttggggctgccgatgttc
gtcaagccggccaaccagggttcatcggtgggcgtgagcaaggtgtctgacgaggccggt
ttcgcggcagcactggcgctgggtttcgagttcgatcacaagctgctgatcgagcagggc
atcgttggccgggaagtggagtgcgcggtattgggtaacttcgatgcgcaggtcagtgtc
tgtggcgaagtgattgccaacgatgaattctatgcctacgacaccaagtacctgaatggc
gatcaggcacgcatcgccattcccgccgagctgcccgccgacctgagtgatcaggtgcgt
gacgtcgcgttgcaggcgtacaaggtgctgggctgcgcagggctctcgcgggtcgatttc
ttcgtcaccgaagggcgcgacatcatcatcaacgaggtcaacacgctgccgggcttcacc
tcgatcagcatgtaccccaagctctggcaggccagcggtctgtcgtatgccgaactgatc
catcgcctgatcgttctggcgctggaacgggctgatcaggcgcggctgctgaaaacggag
atctttccatga
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