Pseudomonas syringae pv. syringae B728a: Psyr_3970
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Entry
Psyr_3970 CDS
T00246
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psyr_3970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_3970
Enzymes [BR:
psb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Psyr_3970
DNA repair and recombination proteins [BR:
psb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Psyr_3970
Prokaryotic type
Psyr_3970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAY39000
UniProt:
Q4ZPC2
LinkDB
All DBs
Position
complement(4718010..4718702)
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AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPSWKNALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGIAPIDWRLPAL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgacgaccgcatcaagcttgagcccagctggaaaaacgccctgcgtgacgaa
ttcgaacaaccctacatggctcaattgcgcgagtttctgcgtcaggagcacgcggcgggc
aaggaaatctatccgcccggtccgctgattttcaatgcgttgaactccacgccgctggat
aacgtgaaagtggtcattcttggccaggatccgtatcacggcccgaatcaggcgcatggt
ctgtgcttctcggtgcaaccgggtgtgccgacgccgccatcgctggtcaacatctacaaa
gagctgaaacgcgacctgaacatcgatattccgaaccacggttgcctgcaatcctgggct
gatcagggcgtgctgttgctgaacaccaccctgaccgtcgaacgtgccaacgcggcgtcg
catgcgggcaaaggctggcagcacttcactgaccggatcatccaggtggtcagcgagcat
cagccgcatctggtgttcctgctgtggggcgctcatgcgcagagcaagcagaaactggtc
gatgcgaccaagcatctggtgctgacctctgtccatccttcgccgttgtcagcctacaaa
ggcttcctgggcaacgggcacttcgggcgggccaacaagtaccttgagcaaaacggcatc
gcgccgattgactggcgcttgcctgcgctctga
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