Pseudomonas syringae pv. syringae B728a: Psyr_4100
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Entry
Psyr_4100 CDS
T00246
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00470
D-Amino acid metabolism
psb00550
Peptidoglycan biosynthesis
psb01100
Metabolic pathways
psb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Psyr_4100
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Psyr_4100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Psyr_4100
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psb01011
]
Psyr_4100
Enzymes [BR:
psb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Psyr_4100
Peptidoglycan biosynthesis and degradation proteins [BR:
psb01011
]
Precursor biosynthesis
Amino acid ligase
Psyr_4100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
AAY39130
UniProt:
Q4ZNZ2
LinkDB
All DBs
Position
complement(4888521..4889480)
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AA seq
319 aa
AA seq
DB search
MTAVAQSSLRSTLEPKSFGRVAVLFGGKSAERAVSLNSGNAVLGALLEAGVDAFGIDVGD
DFLQRLVSEKIDRAFIVLHGRGGEDGTMQGLLECLEIPYTGSGVLASALAMDKLRTKQVW
QSLGLATPAHAVLENESDCICAATELGLPLIVKPAHEGSSIGMAKVNSVDELIAAWKAAS
TYDSQVLVEQWIQGPEFTVASLRGQVLPPIGLGTPHSFYDYDAKYLASDTQYRIPCGLGD
AQEQELKQLAARACDAIGIAGWARTDVMQDAQGKFWLLEVNTVPGMTDHSLVPMAARAAG
LDFQQLVLAILADSVQARG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgttgcccagtcgtccctgcgctcgactctcgagccgaaaagcttcggccgt
gtcgccgtgctcttcggtggcaagagtgccgagcgtgcggtctcgctgaactcgggtaat
gccgtgctcggcgcgttgctcgaggctggtgtggatgcgttcggcatcgatgtgggcgat
gacttcctgcagcgactggtcagcgaaaaaatcgaccgtgcctttattgttctgcacgga
cgcggcggtgaagacggcaccatgcaaggcctgctggaatgcctggaaatcccttatacc
ggcagtggcgtactggcttctgcgctggcgatggacaagctgcgcaccaagcaggtctgg
cagagtctgggccttgctacaccggcgcatgccgttcttgaaaacgagagtgattgtatt
tgcgcggcgacggaactgggcttgcctttgatcgtcaaaccggcccatgaaggttcaagt
atcggtatggcaaaggtgaacagcgtcgatgaattgatcgccgcctggaaagccgccagt
acctacgattcgcaagtattagtcgaacaatggattcagggacctgagttcactgtggcg
tctctgcgtggccaggtgttgcctcccatcggcctgggcactcctcacagtttttatgat
tacgatgccaagtaccttgcgtccgatacccagtatcggattccgtgcggacttggcgat
gcgcaggaacaggaactcaaacaacttgcagcacgtgcttgcgatgccattggcattgca
gggtgggcgcgcacggatgtcatgcaggacgcacaaggcaagttctggttactggaagtc
aatactgtaccgggcatgaccgatcacagtctggtgcctatggcggcccgtgcggcaggt
ctggattttcaacaactggtgttggcgattctggccgacagcgttcaggcgaggggttaa
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