Mollisia scopiformis: LY89DRAFT_627088
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Entry
LY89DRAFT_627088 CDS
T04865
Name
(RefSeq) nucleoporin-domain-containing protein
KO
K14312
nuclear pore complex protein Nup155
Organism
psco
Mollisia scopiformis
Pathway
psco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LY89DRAFT_627088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_627088
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LY89DRAFT_627088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
28820859
NCBI-ProteinID:
XP_018064877
JGI:
627088
UniProt:
A0A132BDM3
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MSFAATPQRPLPGAYFATPAPSRFAQGAPIRQPSFTGQPRPPPGPDPNDGQPNPQSRQPP
APQALQPVQRAARTINEVLQREASFPDLDSYVRQGISSDYDLPNPTTEAAWSPFHRTKMY
DIPDRIFEQYNQAEVSTMMGLFAELNHAWVTIDNALYLWDYTNPNPELIGFEEQSNSITA
VKMVKPRAGVFVKDITHLLVVATTAEMILLGVAAGTTAAGVKTVALYQTKMSLSIRGINV
QVIEGSAVTGRIFFAGKADNEVYELTYQQEEKWFASRCSRINHTSPGYTSLVPAIWAGNS
QEHVVMMVVDDSRRLLYTLSSESSIRTFHMDSPTTLTQAIEKKRQEFLRDISHMISQSTL
LTNTMKICSISPISAKEGSKLHLMATTSTGCRLFLSATRGYAYGTSQGAPQSMQVQHIKF
PPRIDSKPAGQSQSVSSYGASEPATDTSSLALSFTQTGLRFPPGLFFAFVRKSENQGRDS
LFLSGPDTGRIAFQSRDISVQASKYFEQACWLNLNSHAEDVGLVTKPFAAASQPIGFGNE
LAVQYDEAPQEVAILTNTGIHIIRRRRLVDIFASAIRNQGGEEALENEIKKFIRNYGRAE
TTATALAVACGQGSDITPGDPRLARVNNPETLELARKCFVEFGGRPSVDQNMVSEPSQAI
DNVRPSSRHEGLALYMGRLVRSVWKSSVITQIVPKTPSAPTQINTTVPLAKLIAIQEDLT
KLATFLDKNKSFIEGLAGPESLQRTASQQEAIALQGEHQALYSLQKLNSSIIEGISFVQM
LFDERVDQIWSTLDDGVKQRLRDLTYEILFSSDQGKELAKVLVKAIVNRNIANGSNVDTV
AEALRRRCGSFCSADDVIIFKAQEQLKKASEVGANSDMGRKLLNESLKLFQQVAGALSFD
NLETAADQFTQLQFYAGAISLALLVAHESDRGNRALSWVNENKPVDDARAPLYAFRSRCY
DLIHRILLVVDASTSAEPEMLDGRLTLTATKRNEAHAVVNESDDELFQYNLYEWYLSQGW
VDMLLSVESAFIVQFLTKSASQRFDRADLLWKFHVHRNQFYEAAAVQLELAKSTFIIPLA
QRIEYLSRAKANALAQSLGIGRQARHALQYEVSELLDVAMIQDELLQRLRHDQRIQVQRR
DEIVAELNGPIIPLSDLFNAYADQASYHDICLSIYEAADHRNEADINATWQALVDQTHNK
VVEAGDNANQQPYEAIITMVRAMHQRLGSSEICFSPQFLISLLERYAIENQNGVGPEFWL
PDLFMEVEFAFETIVQILQSMWYSNITPFTGRRKQILASHLLYVLEQWFLDCERNNNRLF
GSEENAQDISQLLEVLGAGGDALRQQDVEKCAELRRKILRSFR
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgcagcaactcctcagcgtcctctgccaggcgcatactttgctacgccagct
ccttcgagatttgctcaaggcgcaccaatccgccagccctcattcacaggtcagcctcga
ccaccaccagggccagatccaaatgatggacaaccaaatcctcaatcgcgccaacctccg
gctccacaagctctacaaccagtccaaagagctgctcgaaccatcaatgaggttctccag
cgtgaagcaagcttccccgaccttgatagctatgtgagacagggcatctcctccgactat
gatctcccaaacccgactacggaggctgcttggtcgcccttccatcgaacgaagatgtac
gatatccctgaccgaattttcgagcaatacaaccaagctgaggtctcgaccatgatgggc
ctatttgctgaactgaaccatgcttgggttacgatcgataatgcgctgtatctgtgggac
tatacgaatccaaatcctgagctcattgggtttgaggagcagtcgaatagcattacggct
gtaaaaatggtgaagccaagagctggagtctttgttaaggatattacacacttgctggta
gttgctactacggcagaaatgattttactgggcgttgcggctggtacgactgctgctgga
gtgaagaccgttgcgttgtatcagacgaagatgtcactttcaatccgaggcatcaatgtt
caggtcatcgaaggttctgcggttactggacgcatattctttgctggaaaggcagataac
gaggtctacgaactcacatatcaacaggaggagaagtggttcgccagcagatgtagtcgg
atcaaccatacgagccctggctacacatctctggtacctgcgatttgggctgggaattca
caggagcatgttgtaatgatggtggtggatgatagcagacgactactgtataccctttca
tccgagtcgtctattcggacatttcatatggacagccccacgacactcacccaagccatc
gaaaagaagagacaggagtttcttcgagatattagtcacatgatctcacaatcgacactc
ctcacaaacaccatgaagatttgctccatcagccctatctccgctaaggaaggctcgaag
ctacatctcatggctactactagtaccggctgcagacttttcttgagtgcaactcgaggc
tatgcatacggtacatcacaaggcgctcctcaaagtatgcaggtacagcacatcaagttt
ccacctcgcatcgattcgaaacctgctggccaaagccagtcagtttcttcatatggtgct
tctgaaccagccactgacacttcatctctcgcactctcatttacacagacgggtctacgc
ttcccacctggactcttcttcgctttcgttcgcaagagtgaaaaccaaggtcgggattct
ctcttcctttctggtcctgatacaggtcggatagccttccagtctcgagatatcagtgtt
caagcttccaagtactttgaacaggcttgctggctcaatttgaacagccatgctgaggat
gtcggccttgtcaccaaaccattcgctgctgcatcacagcccatcggctttggtaacgag
ctcgctgtgcagtacgatgaagccccacaggaggttgctattctcaccaatactggcatc
catatcattcgacgaagacgattggttgacatctttgcatctgcgatccgaaatcaaggt
ggcgaggaagcgcttgagaatgagattaagaagttcatccgcaattacggtcgagctgag
acgactgctactgctctagccgtagcgtgtggtcaaggcagcgatatcacaccgggtgac
ccaagacttgctcgagtcaacaaccctgaaacattggaattggcacgcaagtgttttgtc
gagtttggtggacgaccttcggttgaccagaatatggtttctgagccatcgcaagccatt
gacaacgtccgaccatcatctcgccacgaaggtttagctctgtacatgggcaggcttgtt
cgttccgtctggaagtcatctgtcatcactcaaatcgtcccaaagacgccaagcgcgcct
acacaaatcaacacaactgttccattggccaagcttatcgcgatccaggaggatttgacg
aagttggcaaccttcttagacaagaataaatcattcattgaaggtctcgctggccccgag
agtctgcagcgaactgccagccaacaagaagcaattgctcttcagggcgagcatcaagct
ctctactctcttcaaaaattgaactcgagcatcattgaaggtatatcattcgttcagatg
ctgtttgatgagcgagttgaccagatttggagtactcttgatgatggggtcaagcaacga
ctacgagatcttacctacgaaatcctcttttcctcggatcagggcaaagaactcgcaaag
gtccttgtcaaggccatcgtcaatcggaatatcgccaatggctcgaatgtggatacagtt
gctgaggcacttcgacgccgatgtggtagcttctgcagcgctgacgacgtaatcatcttc
aaagctcaagagcaattgaagaaggcttctgaagtcggtgcaaacagcgatatgggtcgc
aagctactcaacgagagcttgaagcttttccaacaagttgctggtgctctgtcgtttgac
aatctggaaactgctgctgatcaatttacgcaacttcagttttatgctggtgccattagc
ctagcacttctagttgctcacgaatctgatcgcggcaatcgtgcattatcatgggtcaat
gaaaataaacctgttgacgatgctcgtgctcctctctacgcattcaggagcagatgttac
gatcttattcatcgcattctacttgttgtcgatgcctctaccagtgcagaaccggagatg
ctggacggtcgacttactttgactgccacaaagcgtaacgaggcacatgctgttgtcaac
gaatcggacgatgagttgttccaatacaacttatatgagtggtatctcagtcagggctgg
gtcgacatgttactgtctgtggaatctgctttcattgtccagttcctcacgaagtcagca
agtcaaaggtttgatcgagccgacttactctggaaattccacgttcaccgcaatcaattt
tacgaagctgctgctgtgcaattggaattggccaagagtactttcatcatccccctcgct
cagcgcattgagtatctcagcagagctaaggcgaatgctttggcccaaagtcttggtatt
ggcaggcaagcacgacatgctttgcagtacgaagtctcggagttgctcgatgtggccatg
attcaagatgagcttctgcagagattaagacacgatcagagaattcaagtgcagagacgt
gatgagattgtcgctgagcttaatggtcccattattcccctatcagatctgttcaatgca
tacgcggatcaagcatcctaccatgatatctgcctcagcatctacgaagctgccgatcat
cgcaacgaagccgatataaacgcaacgtggcaagctctcgtcgaccaaacccacaacaaa
gtcgttgaagccggtgataacgcgaatcagcaaccatatgaagccatcatcactatggtc
cgcgccatgcatcaacgtcttggctcatccgaaatttgcttttctccgcaattcctcata
tctcttctggagcgatatgccatcgagaatcaaaatggagttgggcccgagttctggctt
ccggatctcttcatggaagtcgagtttgctttcgaaacaattgtgcaaatcttgcagtcg
atgtggtatagcaacatcacccctttcaccggtcgccggaagcagatccttgcctcacat
cttttgtatgttcttgagcagtggttcttggactgcgaacgcaacaacaatcgtctgttt
gggagcgaagagaatgcgcaagacatttcacagttgcttgaggtcttgggcgctggtgga
gatgcgttgagacaacaggatgtggagaagtgcgcagagctgaggagaaagatcttgagg
tctttcagatga
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integrated database retrieval system
