Mollisia scopiformis: LY89DRAFT_714267
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Entry
LY89DRAFT_714267 CDS
T04865
Name
(RefSeq) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
psco
Mollisia scopiformis
Pathway
psco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LY89DRAFT_714267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_714267
Enzymes [BR:
psco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LY89DRAFT_714267
Spliceosome [BR:
psco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
LY89DRAFT_714267
Complex C
U5 SnRNP specific factors
LY89DRAFT_714267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Asp_DH_C
PRAI
DUF3275
DUF3334
Motif
Other DBs
NCBI-GeneID:
28827843
NCBI-ProteinID:
XP_018076831
JGI:
714267
UniProt:
A0A194XQN3
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MASFTNGASIPPPPMEVNGRLPSPPPPPPDSLVPPPPPDATAPPPPPSNDLPPPPPVDAL
PPPPEELANGLVKKKKAGWGAQRDRGPLSIEDILKKKKDADEAAAKPKFLSKAAREKLAL
EKRAKEVEEQKRKLEAERTPAKPSTNGHAVPNGRETSNRDSQNHSNGRGSSSVPTGPRAM
RHGDAHTVPAPSRNSQTNRTGDMGPPTKPASSTGKASLAGEKRPANSDDTQAALIRTRYM
GADTNQSTFSAKKKRRRTTEKKFNFEWNAEEDTSPDYNPIYSSRTEAGFYGRGRLGGFAE
DLSEAGALKYAKALQERDVEAGHARAEQIMEMEKRRKEDAGGRNSLDKHWSEKKLEHMRE
RDWRIFKEDFNISTKGGGIPNPMRNWQESNLPKRLLDIVAQVGYDQPSAVQRAAIPIALQ
ARDLIGVAVTGSGKTAAFLLPLLVYISELPPLNEFTKNDGPYAIILAPTRELAQQIEVEA
KKFATPLGFTCVSIVGGHALEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIM
DEADRMIDLGFEESVNKILDALPVGNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATM
PAAVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFISGEDKRKKRLNEILASGEFQPPI
IVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASIRSGATNVLVATDLAGRG
IDVPDVSLVVNFNMATNIESYTHRVGRTGRAGKTGVAITFLGNEDSDVMYDLKQMLMKSS
ISRVPEELRKHEAAQQKSTRGGGGQKKIEDGTFGGKGAGW
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttcactaacggcgcttcgatacctccgccacctatggaggtcaatggaagg
ttaccatcccctcctccacctcctccagattcattagtacctccgccccctccagatgct
acagcacctcctccgcctccaagtaacgatcttccccctcctccacctgtcgatgcatta
ccgcctcctcctgaggagctcgcgaatgggcttgtgaaaaagaagaaagcgggatggggc
gctcaaagagaccgaggaccactgagtatcgaagatatcctcaaaaagaagaaagatgcc
gatgaggctgctgcaaagccaaagttcttgtccaaagctgctcgagaaaagttagccctt
gagaagcgggcgaaggaagtcgaggagcagaagcgaaaactcgaagcggagcggacgcct
gcgaagccgtctaccaacgggcatgccgtaccaaatgggagggagacatcaaacagagat
agccagaaccattcaaatggtcgaggttcgtcttctgttcccacaggacctcgagcaatg
cgacatggtgatgctcacactgtcccagctcctagtcgcaattcacaaacgaatcgcacg
ggagatatgggacctccgacaaaacctgcatcctctaccggcaaagcctccctagcggga
gagaagcgtcctgcaaatagtgatgatacacaggctgctctgattcgaacacgatatatg
ggtgctgataccaatcagtctacattttcggcgaagaagaagcgacggcgcaccacggaa
aagaagtttaacttcgagtggaatgcggaggaagacacaagtccggactacaatcctata
tactcctcacgtactgaagctggcttctatggcagaggtcgtcttggtgggtttgccgaa
gatctcagtgaagccggcgcactgaagtatgccaaggcacttcaggagcgtgatgtggaa
gctggtcacgcaagagctgaacagataatggagatggagaaacggaggaaagaagatgct
ggcggaagaaactcacttgacaaacattggagtgagaaaaaattggagcacatgcgagaa
agagactggcgtattttcaaagaagatttcaacatcagcacaaagggcggaggaattcca
aaccccatgcgaaattggcaagaatcaaaccttccaaagcgcctgttggacatcgttgct
caagttggatacgatcagccctcagcggtgcagagagcggcaatacctattgccttgcaa
gctagagatttgatcggagtggcagttactggttccggaaagactgctgcgttcctgctt
ccattacttgtctacatctccgagttaccgcctctcaatgagttcacgaagaatgacggc
ccatatgccattattcttgctccaactcgtgagttggctcaacaaattgaggttgaggct
aagaagttcgcaacgcctctgggtttcacttgtgtcagtatcgttggtggacatgcgctt
gaagaacagtcttacaatctgcgcaatggtgccgagatcatcatagcaaccccaggtcgt
ttagtagactgcatcgaaagacgggttctagtgcttggtcaatgctgttacatcattatg
gatgaagctgatcgtatgattgatcttggtttcgaggaatctgtgaacaaaattctcgac
gcgcttccggtcggcaacgagaagccagacacagacgacgcagaagatgcccaggcaatg
agtagacacctgggtggaaaggacagatacaggcagacgatgatgtacacggctactatg
cctgcagccgtggagaagattgccaagaagtatttgagaaggcccgcaatagttacgatc
ggtaatatcggagaagcggtcgagactgttgaacaacgagtcgagtttatttcgggcgaa
gacaagaggaaaaagaggctcaacgagattcttgcctctggagaatttcaacctccaatc
atcgtcttcgtcaacatcaagagaaattgcgatgctgttgctcgggacatcaaacatatg
ggtttcacatcagtcactttgcatggtagcaagacgcaagaacaacgtgaggctgctttg
gcatctatccgttctggagcaacaaatgtcttggttgctacagatcttgcaggcagaggt
attgatgtgcccgatgtcagcctggttgtcaacttcaacatggctactaacatcgagagt
tatactcatcgtgttggtagaacaggtcgtgctggaaagactggtgtggcaattaccttc
ctgggtaatgaggactcggatgtcatgtacgacttgaaacagatgttgatgaagagctcc
atatcgcgtgttccggaagaactacgcaaacatgaagctgctcaacagaagtcaaccaga
ggtggaggcggccagaaaaagatcgaggatgggacttttggtggaaagggggcgggttgg
tga
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