Pseudoxanthomonas spadix: DSC_02890
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Entry
DSC_02890 CDS
T01643
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd00470
D-Amino acid metabolism
psd00550
Peptidoglycan biosynthesis
psd01100
Metabolic pathways
psd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSC_02890 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSC_02890 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DSC_02890 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psd01011
]
DSC_02890 (ddl)
Enzymes [BR:
psd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
DSC_02890 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
psd01011
]
Precursor biosynthesis
Amino acid ligase
DSC_02890 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
RimK
ATP-grasp_5
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AER55231
UniProt:
G7UWB8
LinkDB
All DBs
Position
413131..414087
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AA seq
318 aa
AA seq
DB search
MSAPSFPPPRNTDPAAFGRVAVLMGGTSSEREVSLNSGRNVLEALQARGVQAHAVDGLPA
LLEQIRAGAIDRVFNILHGGDGENGVLQGLLSALKVPFTGPGVLGSALTLDKIRTKQVWI
ASGLPTPAFRRIRRGDDLRAAAAELGLPVFVKPSTEGSSVGVFRVLAEQDLQPAIDFAAG
YDGELLIEQMVQGEEYTVGILDGIALPSIRIVPAGAWYDYHAKYIAEDTQYLCPGLSGQE
EAQIRQLSLAAFESAACSGWGRVDVMRDVSRGLQLIEVNTAPGMTSHSLVPKAARQAGIG
FEELCWRILESTFQARPA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccgtccttcccgccgccgcgcaacaccgatccggccgcgttcggtcgggtt
gccgtgttgatgggcgggacctccagcgagcgcgaggtgtccttgaactcggggcgcaac
gtgctcgaggccttgcaggcgcggggcgtgcaggcccatgcggtcgatggcctgccggcc
ctgctggaacagatccgggccggtgccatcgatcgggtgttcaacatcctgcacggcggc
gacggcgaaaatggcgtgctgcagggcctgctgtcggcgctgaaggtgcccttcaccggg
ccgggcgtgctgggcagcgccctgaccctggacaagatccgcaccaagcaggtgtggatc
gcctcgggcctgccgaccccggccttccgccgcatccggcgcggggacgacctgcgcgcg
gcggcggccgagctgggtctgccggtgttcgtcaagccctcgaccgaaggctccagcgtg
ggcgtgttccgggtcctggccgagcaggacctgcagccggccatcgacttcgccgccggt
tatgacggcgagctgctgatcgagcagatggtgcagggcgaggaatacaccgtcggcatc
ctggacgggatcgcgctgccctcgatcaggatcgtgccggccggagcctggtacgactac
cacgccaagtacatcgccgaggacacccagtatctgtgcccgggcctgtccggccaggag
gaagcgcagatccgccagttgtcgctggctgccttcgaaagtgccgcctgcagcggctgg
ggtcgggtggatgtgatgcgcgatgtgtcacgcggcctgcagttgatcgaagtgaacacc
gcgccgggcatgaccagccattcgctggtgcccaaggcggcgcgccaggccggtatcggt
ttcgaggaactgtgctggcgcatcctggaatccacctttcaggcgcgcccggcatga
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