Pseudoxanthomonas spadix: DSC_08195
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Entry
DSC_08195 CDS
T01643
Name
(GenBank) hypothetical protein
KO
K21025
multidomain signaling protein FimX
Organism
psd
Pseudoxanthomonas spadix
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_8
PAS_4
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AER56290
UniProt:
G7UUJ9
LinkDB
All DBs
Position
complement(1591408..1593486)
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AA seq
692 aa
AA seq
DB search
MQIGKDTPVRLIIVDDSGDAAEAVVSTFRNEGIAVRALRPLDLDELARQLASQPVDLVLA
ARGARGIPVHDVLAQVLASGKDIPVVIMIDAPGDASVIDELVHGARALALRTRPDHLLSV
LRNEWEDLESRRGLRRLEAQLRETERRCDALIASSRDPIAYVHEGMHIRANDAYLEMFGF
ESFEDIEGLSLLDLIAPKDVDDFKQLLKRIGKGEAPPPRYECQARTQAGEGFPAVMEFVT
ASYEGEPCVQVVFRRRELNTELAREVQDLRQRDMVTGLLNRPAFLHALEDAVAEVAQSDV
QYGLLLVEPDHYARLLPDIGLDWADALIAAMAAHFTATLEPDMVAARFTEHGFAVLCKGA
HTHTTELAEALRAGFASHVFEIGNRAVTVTLSIGGVQIGEKIASVGQVLARASENLQSAA
NLGGNGVQIFDPAAVDRAEQEREQRILGLVRHALAEQGFVLHYQPIIPLLGEPGDFYEVF
LRLETTGGERIKPVSFLAIAEQAGLLGEIDRWVVARAIAVLGERERAGRPVRLLVKVSQA
SFGDPRLIELIARELAAHGVPGQRLWLETTEAKVFTHLRGAQDLLTAATGLGCKVGLEQF
GTGLDSFQLLAHFTPAFLKLDRSFCQDQTRATEAQDKIRQITARAQRDGMVTIAEHIQDP
ATMSLLFGAGIDYVEGHFVGQAAPEMSFDFTA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcggtaaagacacccccgtgcgactgatcatcgtcgacgacagcggcgatgcg
gccgaagcggtggtcagcaccttccgcaacgaaggcatcgcggtgcgcgccctgcgcccg
ctggacctggacgaactggcccggcagctggccagtcagccggtggatctggtcctggcg
gccaggggcgcccgcggcattccggtgcacgacgtgctggcccaggtcctggccagcggc
aaggacatcccggtggtgatcatgatcgatgcaccgggcgatgcctcggtgatcgatgag
ctggtccacggcgcgcgcgccctggcactgcgcacccgcccggaccatctgctcagcgta
ttgcgcaacgaatgggaagatctggaatcgcgccgcggcctgcgccgcctggaggcccag
ctgcgcgagaccgagcgccgctgcgatgcgctgatcgcctcctcgcgcgatcccatcgcc
tacgtgcatgaaggcatgcatatccgcgccaacgatgcctaccttgagatgttcggcttc
gagtccttcgaggacatcgaaggcctgtcactgctggatctgatcgcacccaaggacgtg
gatgacttcaagcagctgctcaagcgcatcggcaagggcgaagccccgccgccgcgctac
gaatgccaggcccgcacccaggccggcgagggcttcccggcggtgatggaatttgtcacg
gccagctacgaaggcgagccgtgcgtgcaggtcgtgttccgccgccgcgagctcaacacc
gagctggcacgcgaagtccaggacctgcgccagcgcgacatggtgaccgggctgctcaac
cgcccggccttcctgcacgcactggaagacgccgtggccgaggttgcccagagcgatgtg
cagtacggcctgctgctggtcgaaccagaccactacgcgcgcctgctgccggacatcggc
ctggattgggccgatgcgctgatcgcggcgatggccgcgcacttcaccgccaccctggag
ccggacatggtggccgcgcgcttcaccgagcacggctttgcggtgctgtgcaaaggcgcg
cacacccataccaccgagctggccgaggcgctgcgtgcgggcttcgcctcgcacgtgttc
gagatcggcaaccgtgcggtgaccgtcaccctgagcatcggcggggtgcagatcggcgag
aagatcgccagcgtcggccaggtcctggcgcgcgccagcgagaacctgcagtcggcggcc
aacctgggcggcaacggtgtgcagatcttcgacccggccgcggtggatcgcgccgaacag
gaacgcgagcagcggatcctgggcctggtgcgccatgcgctggccgagcaaggcttcgtg
ctgcactaccagccgatcatcccgctgctgggcgagccgggcgatttctacgaggtcttc
ctgcgcctggaaaccaccggcggggaaaggatcaagccggtgagcttcctggccatcgcc
gagcaagccggactgctgggcgagatcgaccgctgggtcgtggcccgtgcgatcgcggtg
ctgggcgagcgcgaacgcgccggccgcccggtgcggctgctggtcaaggtcagccaggcc
tcattcggcgatccgcgcctgatcgagctgatcgcgcgcgagctggccgcccacggcgtg
ccgggccagcggctgtggctggaaaccaccgaggccaaggtgttcacccacttgcgcggc
gcccaggatttgctgaccgccgccaccgggctgggctgcaaggtcggcctggaacagttc
ggcaccggcctggattcgttccagctgctggcccacttcactccggccttcctcaagctg
gaccgcagcttctgccaggaccagacgcgcgccaccgaagcccaggacaagatccgccag
atcaccgcccgcgcccagcgcgatggcatggtcaccatcgccgagcacatccaggatccg
gccaccatgtcgctgctcttcggtgcgggcatcgactacgtggaaggccacttcgtcggc
caggcggcgccggagatgagcttcgacttcaccgcctga
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