Pseudonocardia sp. AL041005-10: WY02_04230
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Entry
WY02_04230 CDS
T04051
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psea
Pseudonocardia sp. AL041005-10
Pathway
psea03030
DNA replication
psea03410
Base excision repair
psea03420
Nucleotide excision repair
psea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WY02_04230
03410 Base excision repair
WY02_04230
03420 Nucleotide excision repair
WY02_04230
03440 Homologous recombination
WY02_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psea03032
]
WY02_04230
03400 DNA repair and recombination proteins [BR:
psea03400
]
WY02_04230
Enzymes [BR:
psea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WY02_04230
DNA replication proteins [BR:
psea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WY02_04230
DNA repair and recombination proteins [BR:
psea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
WY02_04230
NER (nucleotide excision repair)
GGR (global genome repair) factors
WY02_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
DNA_pol_lambd_f
HHH_2
ERp29_N
PDDEXK_5
Motif
Other DBs
NCBI-ProteinID:
ALE77779
UniProt:
A0A0M3U7W1
LinkDB
All DBs
Position
complement(1002553..1005348)
Genome browser
AA seq
931 aa
AA seq
DB search
MSTATQGTQKSASAKKRAPAKPRLLLLDGHSLAYRAFFALPAENFRTGTGQTTNAVYGFT
SMLINLLRDEEPTHLAVAFDVSRRTFRSERYAEYKANRSSTPDDFRGQIDLIKEVLAALN
IPVFAVDGFEADDLIATLATQAEGRGYQVLITTGDRDAFQLVTDDVTVLYPKRGVSDLGR
IDPAEVDKRYGLTPTQYPDFAALRGDPSDNLPSIPGVGEKTAAKWVREFGSLAELTDRVD
EVKGKAGDNLRANLANVLLNRQLTELVRDVDLGATPEELELRPWDRDAVHRLFDELEFRV
LRERLFSTLSSAEPEAESGFEVSGEVVAPGAVRAWLDAHARDGRRVAVSFAGVTGPIAGR
DLDGIALATGEPTVEQRAAGATAGVPAAGYLALTGLTPDDEAALGDWLADASVPKAAHDV
KAVLHALRARGWTLGGLTSDTALAAYLAKPGQRTFDLADLALRYLRRELRTEEPADGQLS
LLGGEEEADTRAAEQEMLAASAIAELADALDADLAERGGSELLADLELPLAFVLADCEAA
GIAVDGETLSDLESDFGAQVREAARQAYEVIGKEINLGSPKQLQVVLFDELEMPKTKRTK
TGYTTDADALASLYEQTEHPFLQFLLQHRDATRLKVTVDGLMKSVAEDGRIHTTYSQTIA
ATGRLSSTDPNLQNVPIRTAAGRRIRDAFVVGSGPDGAPYAELLTADYSQIEMRIMAHLS
EDAALIEAFRSQHDFHAETAARVFGVAATEVSPEQRAKIKAMNYGLAYGLSAYGLSGQLR
ISTEEAKGLMDDYFAGFGGVRDYLAGVVDQARKDGYTATILGRRRYLPDLTSDNRQRREM
AERMALNAPIQGSAADIIKVAMLGVHRALQAEGLRSRMLLQVHDELVLEVADGERETLEV
LVRREMAAAADLSVPLEVSVGSGRSWDAAAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcgacgcagggcacccagaagtcggcctcggcgaagaagagggcaccggcg
aagccgcgcctgttgctgctcgacggccactccctggcctaccgggcgttcttcgcgctg
cccgcggagaacttccgcaccggtaccgggcagaccacgaacgcggtctacggcttcacc
tcgatgctgatcaacctgctgcgcgacgaggagccgacccacctcgcggtcgccttcgac
gtgtcgcgcaggacgttccgctccgagcgctacgccgagtacaaggcgaaccgctcgtcg
acgccggacgacttccgcggccagatcgacctcatcaaggaggtcctggccgcgctgaac
atcccggtgttcgccgtcgacgggttcgaggccgacgacctcatcgccaccctcgccacc
caggccgaggggcgcggctaccaggtgctcatcaccaccggcgaccgtgacgcgttccag
ctggtcaccgacgacgtcaccgtcctgtaccccaagcgcggcgtgtccgacctcggccgg
atcgacccggccgaggtcgacaagcgctacgggctcaccccgacccagtacccggacttc
gcggcgctgcgcggcgacccctcggacaacctgccctccatccccggggtgggggagaag
accgcggccaagtgggtccgggagttcggctcgctcgccgagctcaccgaccgggtcgac
gaggtcaagggcaaggccggggacaacctgcgggccaacctggcgaacgtgctgctcaac
cgtcagctcaccgagctggtgcgcgacgtcgacctcggcgccacccccgaggagctcgag
ctgcgcccgtgggaccgcgacgcggtgcaccgcctgttcgacgagctggagttccgggtg
ctgcgcgagcgcctgttctccaccctgtcctccgccgagcccgaggccgagtccggcttc
gaggtctccggcgaggtcgtcgcacccggcgcggtgcgggcctggctcgacgcccacgcc
cgcgacgggcgtcgggtcgcggtgagcttcgccggggtcaccggcccgatcgccgggcgc
gacctcgacggaatcgcgctcgccacgggcgagccgaccgtcgagcagcgggcggccggc
gccaccgccggtgtcccggccgccggctacctcgcgctgaccggcctcaccccggacgac
gaggcggccctgggcgactggctcgccgacgcgtccgtgccgaaggccgcgcacgacgtg
aaggcggtgctgcacgcgctgcgggcgcggggctggaccctgggcgggctgaccagcgac
accgcgctcgccgcgtacctcgccaagcccgggcagcggacgttcgacctggccgatctc
gcgctgcgctacctgcgccgcgagctgcgcaccgaggagcccgccgacgggcagctgtcg
ctgctcggcggtgaggaggaggccgacacccgggccgcggagcaggagatgctcgcggcc
tcggcgatcgccgagctcgccgacgccctcgacgccgacctcgccgagcggggcggcagc
gagctgctggccgacctggagctgccgctggcgttcgtgctggccgactgcgaggcggcc
gggatcgccgtcgacggcgagaccctgtccgacctggagtcggacttcggcgcccaggtc
cgcgaggccgcgcggcaggcctacgaggtgatcggcaaggagatcaacctcggctcgccc
aagcagctgcaggtcgtgctgttcgacgagctggagatgcccaagaccaagcgcaccaag
accggatacaccaccgacgcggacgcgctggcgagcctctacgagcagaccgagcacccg
ttcctgcagttcctgctgcagcaccgggacgcgacccggctcaaggtgaccgtcgacggg
ctcatgaagtccgtcgccgaggacggccggatccacaccacctactcgcagacgatcgcc
gcgaccggccggctgtcctcgaccgacccgaacctgcagaacgtgccgatccgcaccgcc
gccggacgccggatccgggacgcgttcgtcgtcgggtccggccccgacggcgcgccgtac
gcggagctgctcaccgcggactacagccagatcgagatgcggatcatggcccacctgtcc
gaggacgccgcgctgatcgaggccttccgctcccagcacgacttccacgccgagaccgcc
gcccgggtcttcggcgtcgcggcgaccgaggtgtcgcccgagcagcgcgccaagatcaag
gcgatgaactacggcctggcctacgggttgtcggcctacggcctgtcggggcagctgcgg
atctccaccgaggaggcgaaggggctgatggacgactacttcgccgggttcggcggggta
cgcgactacctcgcgggagtcgtcgaccaggcccgcaaggacggctacaccgccaccatc
ctgggaaggcggcgctacctgcccgacctgaccagcgacaaccgtcagcgccgggagatg
gccgagcgaatggcgctcaacgccccgatccagggcagcgcggcggacatcatcaaggtc
gcgatgctcggggtccaccgggcgctgcaggccgaggggttgcgcagccggatgctgctg
caggtgcacgacgagctcgtcctcgaggtcgccgacggcgagcgcgagaccctggaagtg
ctcgtgcgccgcgagatggcggccgcggccgacctgtcggtgccgctggaggtgtcggtc
gggtccggccgcagctgggacgccgcggcgcactga
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