Pseudodesulfovibrio sediminis: PSDVSF_15900
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Entry
PSDVSF_15900 CDS
T08380
Name
(GenBank) penicillin-binding protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00550
Peptidoglycan biosynthesis
psef01100
Metabolic pathways
psef01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSDVSF_15900
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSDVSF_15900
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psef01011
]
PSDVSF_15900
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psef03036
]
PSDVSF_15900
Enzymes [BR:
psef01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSDVSF_15900
Peptidoglycan biosynthesis and degradation proteins [BR:
psef01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PSDVSF_15900
Chromosome and associated proteins [BR:
psef03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PSDVSF_15900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
HTH_8
DUF6258
Beta-lactamase2
Cytochrom_C_asm
GntR
Motif
Other DBs
NCBI-ProteinID:
BCS88348
LinkDB
All DBs
Position
1669339..1671303
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AA seq
654 aa
AA seq
DB search
MAQDTKGRTDHSTIKIGFVMALFGLALGGLWFRAGWVQIHEGEKLAAKADRQSHVTEYKF
GERGRILDRNGQMLATSIESKSVCAHPYKITNVDVAADMLSRELGIRRTTIYKKLKSKRN
FVWIKRQVTDRESSAVLKSKLPGVVLTSEYHRIYPNEHLAGQILGFVDIDGKGREGIERI
YNDRLKPSEAKFVVQRDRKNGRYTLDISRQDVDINGQDIRLTIDIQIQHAAEQALAKSIA
KYDARSGIVLVVDVSTGDILAMANQPFFNPNTVRSSKAYQRRLRALTDSYEPGSTLKPIL
FAAALEEKVIEPDTLINCENGRWHVARRLIRDTHPEQWLPANKVLRYSSNIGSAKIGMEL
GAERYYSYLAKLGFGEKTNIGLPGESSGIMRPAARWTSVDLAAISFGQGIGATALQMAKA
FLCIANQGATRELNLVKSPKAERKNVSVQVFSPETTAKVLSMMKDVVHEDGTGRSARIEG
ITMAGKTGTAQKASPKGGYGDQYLSSFVALVPADNPELMVITMIDEPQKANYGSMVAAPV
CREVTVRTLAYHGKLSETLVADDAEIVPMDEIVESAKSDIGPAQVQAVIDTDRVPNIAGM
PVRRALEVLVKMGIVPVLKGTGMTVKRQKPAAGTPWPEDQTSEGEDDVFILWLS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggacacgaaagggcgcacagatcacagcacgatcaaaatagggtttgtaatg
gccctgtttggtcttgctttgggtggtctgtggttccgcgccggatgggtgcaaatccat
gaaggcgaaaaattggccgcaaaggccgacaggcagagccacgtaaccgaatacaagttc
ggcgagcgcggccgtattctcgatcgcaacggtcagatgcttgcaacgtccatcgagtcc
aaatccgtctgcgcccatccctacaagatcaccaatgtggatgtggccgcggatatgctc
tcccgcgagctgggcattcgccgcaccacaatctacaagaagctcaagtccaaaagaaat
ttcgtctggatcaaacggcaggtcacggaccgcgagtcctctgccgtgctcaaatccaaa
ctccccggcgtggtcctgaccagtgaatatcaccgcatttaccccaatgaacatcttgca
ggacaaatcctcggcttcgtggacatcgacggcaaaggtcgcgaaggcatcgagcggatc
tacaacgaccgcctcaaaccgagcgaagccaagttcgtggtccagcgcgaccgcaagaac
ggccgctacaccctcgacatctcaagacaggacgtggacatcaacggtcaggacatacgg
ctgaccatcgacatccagatccagcacgccgcggaacaggctctggccaaatccattgcc
aaatacgacgcccgctccggcattgtgctcgttgtcgatgtttcaaccggcgacattctg
gccatggccaaccagcccttcttcaacccgaacacggttcgctcttccaaggcctaccag
cgcagactgcgtgccctgaccgattcctacgagccgggttcaacattgaagccgatcctg
ttcgctgccgcccttgaagagaaagtcatcgaaccggacacgcttatcaactgcgaaaac
ggccgctggcatgtcgcccgcaggctcatccgcgacacccacccggagcaatggctgccc
gcaaacaaggtgctgcggtactcctccaacatcggttcagccaagatcggcatggaactc
ggtgcagagcgctattactcctatctggccaaactcggttttggcgaaaagaccaatatc
ggcctccccggcgagtcctccggcatcatgcggcctgccgcacgatggacgtccgttgat
ctcgcggccatcagcttcggacagggcatcggcgccacagccctgcaaatggccaaggca
tttctctgtatcgccaatcagggcgcaacgcgcgaactcaatctggtcaaatcaccaaag
gccgaacgcaagaacgtctcggtacaggttttcagtcccgaaaccacggccaaggtcctg
tccatgatgaaggacgtggttcacgaagacggcacaggacgcagcgcgcgcatcgaaggc
atcaccatggcgggcaagaccggcaccgcacagaaagcctctcccaagggcggctacggc
gatcaatatctttcctccttcgtcgccctggtcccggccgacaaccccgagctgatggtc
atcaccatgatcgacgaaccgcagaaggccaactacggctccatggtggcggcaccggtc
tgccgcgaggtgaccgtgcgcacgctggcctaccacggcaagctctccgaaacacttgtg
gcggatgatgccgaaatcgtgcccatggatgagatcgtggaaagcgccaagtcggatatc
ggcccggcgcaggtacaggccgtcatcgacacggaccgtgttccgaacatcgctggcatg
cccgtccgaagggcactcgaagttttagtgaaaatgggaattgtccctgtgctcaaaggc
acgggaatgacggtcaaacggcagaaacccgcggcgggtacaccctggccggaagaccaa
acttcggagggagaggatgatgtttttattctctggctctcatag
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