Pseudodesulfovibrio sediminis: PSDVSF_17320
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Entry
PSDVSF_17320 CDS
T08380
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00470
D-Amino acid metabolism
psef01100
Metabolic pathways
psef01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSDVSF_17320 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PSDVSF_17320 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psef01011
]
PSDVSF_17320 (alr)
Enzymes [BR:
psef01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PSDVSF_17320 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
psef01011
]
Precursor biosynthesis
Racemase
PSDVSF_17320 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
BCS88490
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All DBs
Position
complement(1815280..1816404)
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AA seq
374 aa
AA seq
DB search
MIEYNKLRVRVHLDNLRHNYRTYTRLHDRVIPVIKSDAYGHGLLEVSRALESEGVDTFAV
GFVHEAAALRQGGCDKRILALLGPIDAADDALLWEHEILAAVSHFDQLRRLVATAETNGP
LAIGLKFDTGMRRLGFLPEELPQVIEILSGSKLTPVMISSHLASADTPGREVDVEGQHAQ
FQTVIDGLAEAGFEVEANLANSAGALAFEQCRLSSLRQGITLYGGNPFCGTSLEALGREL
KPAMDVVAPVMQVHPLKKGESISYGWTYTAEADSVVAVIGVGYADNYSRSLSNTGEMLIH
GTRVPIRGRVCMQMTAVDVTALMGEGKGVAPGDEAYLLGGPGPETITPEEMAGWWGSISY
EVFCLLGMNQREYI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatacaataaattgcgtgtccgggtccatttggacaacctccgtcacaactac
aggacctatacgcgcctgcatgatcgggtcattccagtcatcaaatccgatgcctatggt
catggtctccttgaagtcagccgtgcgctggagagcgaaggcgttgacacctttgccgtg
gggttcgtgcatgaggcggccgcgttgcggcagggcggatgcgacaagcggatccttgcg
ttgctcggtcccattgatgcggcagatgacgccctcttgtgggagcatgaaattctggcc
gcggtctcccattttgatcagttgcgtcgattggttgcgaccgccgaaaccaatgggccg
cttgccatcggactcaagtttgacaccggaatgcgccgactcgggtttctgccggaagag
ttgccgcaggttatcgagattctctccggctccaagctgacaccggtcatgatcagttct
catctggcttcggctgacacgccggggcgggaagttgatgtggaagggcagcacgcacaa
tttcaaaccgttatcgacgggctggccgaggccggattcgaggtggaggcgaaccttgcc
aactctgccggagccctggcctttgaacagtgccgtctgagttccctgcgtcagggcatc
accctgtacggcggcaatcccttctgcggcacttcgctggaagcgctggggcgggagctg
aaaccggccatggatgtggtcgcgccggtgatgcaggtgcacccattgaagaaaggggag
tccatcagctacgggtggacctatactgcggaagcggattccgtggtggccgtcattggg
gtgggctatgctgacaactacagccgcagcctgtccaacacgggcgagatgctcattcat
ggcacacgagtccccatccgagggcgggtctgcatgcagatgacagcggttgacgtaact
gcgcttatgggtgaaggaaagggcgttgcccctggagatgaagcctatctgctgggcgga
cccgggcctgagaccatcacgcccgaggagatggccgggtggtggggctccatcagttat
gaagttttttgtctgctgggaatgaaccagcgagaatatatttaa
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