Pseudonocardia sp. HH130629-09: XF36_23625 Help Entry XF36_23625        CDS       T04082                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pseh  Pseudonocardia sp. HH130629-09 Pathway pseh03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pseh00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     XF36_23625  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pseh03400]     XF36_23625 Enzymes [BR:pseh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      XF36_23625 DNA repair and recombination proteins [BR:pseh03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      XF36_23625 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  ALE85765 UniProt:  A0A0M3UC91 LinkDB All DBs Position complement(5102070..5102984) Genome browser AA seq 304 aa AA seqDB search MLATPGPLPTGAGWSFEVKWDGMRVLAEVTDGGGEPALRLRTRSGRDVTANFPELAGLVD LAPDVLLDGEVVLLDGGVPSFAALAHRIHGPAGGRPVTFMVFDVLRLYGVPLLDRPLSER RATLERLDLAATPHVEASPLYPDGAALLEVTASRGLEGVVAKREDSRYRPGRRSPHWVKI AHRQSQSCVVGGWKPERGGGGGRVGALLLGVPGPDGLEFAGRVGSGLAGAAVQDLLAARL TEVPESPFARLPPRADAADARWCSPTVVVEVAHLGWTAAGRLRQPVFRGIRDDVEAVDVR REPG NT seq 915 nt NT seq  +upstreamnt  +downstreamnt atgctcgccacccccggacccctcccgaccggcgccggttggtcgttcgaggtcaagtgg gacggcatgcgcgtgctggccgaggtcaccgatggcggtggcgagccggcactgcgtctg cgtacccgttccggccgcgatgtcaccgcgaacttccccgagctcgccggtctggtggac ctcgcccccgacgtgctcctcgacggcgaggtggtactgctcgacggcggtgtccccagc ttcgccgcgctggcccaccggatccacggtcccgcgggcgggcgtccggtcaccttcatg gtgttcgacgtgctgcgcctgtacggggtgccgctgctcgaccgcccgctgtccgagcgc cgggccaccctggagcggctcgacctcgccgctaccccgcacgtcgaggcgtccccgctc tacccggacggggccgccctgctggaggtgacggcgtcgcgcgggctggagggtgtcgtc gccaagcgggaggactcgcggtaccggccgggccggcgcagcccgcactgggtgaagatc gcccaccggcagtcgcagtcctgtgtggtgggcgggtggaagcccgagcgcggcggcggt ggcggtcgggtcggggcgctgctgctcggtgtccccggcccggacggtctggagttcgcc ggccgggtcgggtccgggctggccggggcggcggtgcaggacctgctcgccgcccggctg accgaggtgccggagtcgccgttcgcgcggctcccgccccgggccgacgccgcggacgca cgctggtgctccccgacggtcgtcgtcgaggtcgcccacctcgggtggacggcggcgggc cggctgcggcagccggtgttccgcgggatccgcgacgacgtcgaggccgtcgacgtgcgc cgggagccgggctga

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