Pseudomonas sp. MRSN12121: TO66_22960
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Entry
TO66_22960 CDS
T03702
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TO66_22960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psem02000
]
TO66_22960
Transporters [BR:
psem02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TO66_22960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
nSTAND1
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_22
AAA_25
nSTAND3
AAA
Mg_chelatase
AAA_23
NACHT
AAA_5
Rad17
ATPase_2
NB-ARC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AJO79980
UniProt:
A0A0C5EDF7
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Position
5086952..5087956
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AA seq
334 aa
AA seq
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MSYISIQHLQKSYASPGYAGTPVFSDINCEIRKGEFVTLLGPSGCGKSTLLRCIAGLTPV
DAGQILLDGHDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADESHKRVL
EALRLVELHDFASRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQ
IRQIQRELELTTIFVTHDQEEALTMSDRIFLMNQGRIVQSGDAETLYTAPVDVFAAGFIG
NYNLLDAESASRLLQRPVSGRIAIRPEAIELRKDGEPDAQIRSHSLLGNVIRYRVETRGV
ELVVDVLNRSPDDLHADGQRLALSIDPAALCEVA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagctacatcagcatccaacacctgcagaagagctacgcctcgccaggatacgccggc
accccggtgttcagcgacatcaactgcgaaatccgcaagggcgagttcgtcaccctgctc
ggcccgtccggctgcggcaagtccaccctactgcgctgcatcgccggcctgaccccggtg
gacgccggccagatcctcctcgacggccacgacatcgtgccgctgagcccgcagaaacgc
gggatcggcatggtgttccagagctacgcgctgttccccaacatgaccgtggaacagaat
gtggcgttcggcctgcgcatgcagaaggtcaatgccgacgaaagccacaagcgcgtgctc
gaagccctgcgcctggtggaactgcacgacttcgccagccgttatccccatcagctgtcc
ggcggtcagtgccagcgcgtggccctggcccgctcgctggtgacccggccgcgcctgttg
ctgctggacgagccgctatcggccctggacgcgcggatccgcaagcacctgcgcgagcag
atccggcagatccagcgcgagctggagctgaccacgatattcgtgacccacgaccaggaa
gaagcgctgacgatgtccgaccgcatcttcctgatgaaccagggcaggatcgtccagagc
ggcgacgccgagacgctctacaccgcaccggtggatgtgttcgccgccggcttcatcggc
aactacaacctgctggacgccgaaagcgccagccggctgctgcaacgcccggtcagcggg
cgcatcgcgattcgccccgaggccatcgagctgcgcaaggacggcgaacccgacgcgcag
atccgcagccacagcctgctgggcaacgtcatccgttaccgggtcgagacccgcggcgtg
gaactggtggtggacgtcttgaaccgttcgccggacgatctgcacgccgacggccaacgc
ctggcactttccatcgatcccgcggccctctgtgaggtagcctga
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