Pseudonocardia sp. EC080610-09: AD006_18740
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Entry
AD006_18740 CDS
T04146
Name
(GenBank) hypothetical protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pseq03000
]
AD006_18740
Transcription factors [BR:
pseq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AD006_18740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
GST_C_2
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
ALL76834
LinkDB
All DBs
Position
4061908..4062879
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AA seq
323 aa
AA seq
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MDLTLQQLRAVVAVHDAGGFTAAAHTLHVAQPSLSRVVADVERRLGVRLFERTTRRLEPT
PAGNAVVAAARRALDAVESELRHVDGFLGGREGAVRIATLPSLAAILLPGVVSAFRGARP
GVRTEMSDALADEVLERVRTGRADLAVTVLPDDGAAPPDLLATPVAADRFCALVPPDHRL
AGRPTLRWADLDGEPLVDFDPTTSIRQHVDRALFLAAARPERGLAARNIAAVAGLVAAGL
GVTAVPGLVVPLTGFAGLVAVPLDGPVLTRRIALVVPRGRHPVPAAQAFAAMLTGADRDR
PSLPEHAEWVGPPDGDRPGPVSP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatctcacgttgcagcagctccgggccgtcgtcgccgtgcacgacgccggtgggttc
accgcggccgcgcacacgctgcacgtcgcccagccgtcgctgagccgggtcgtcgccgac
gtcgaacgacggctgggggtgcgcctgttcgagcggaccacccggcggctggagccgacc
ccggccgggaacgccgtggtggccgcggcccggcgtgccctcgacgccgtcgagtccgag
ctgcggcacgtcgacggcttcctcggcggccgcgagggcgcggtccgcatcgccacgctg
ccatcgctcgcggcgatcctgctgcccggtgtggtgtccgcgttccgcggggcccggccc
ggggtgcggaccgagatgtccgacgcgctggccgacgaggtcctcgagcgggtgcggacc
gggcgggccgatctcgcggtgacggtcctgcccgacgacggcgccgccccacccgacctc
ctggcgaccccggtcgcggctgaccggttctgcgcactcgtcccgccggaccaccggctc
gccgggcgccccacgctccgctgggcggacctggacggcgagccgctcgtggacttcgac
ccgacgaccagcatccgccagcacgtggaccgggccctgttcctggccgccgcacgtccg
gagcggggactggcggcacggaacatcgccgccgtcgccggcctcgtcgccgccgggctg
ggtgtgacggcggtcccgggtctcgtcgtcccgctgaccgggttcgccgggctggtcgcg
gtgccgctcgacggcccggtgctcacgcggcggatcgcgctggtcgtgccacggggccgg
catcccgtgccggcggcgcaggcgttcgcggcgatgctgaccggcgccgaccgggaccgg
ccgtcgctgccggagcacgcggagtgggtcgggcccccggacggggaccggcccggcccg
gtcagcccgtga
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