Pseudonocardia sp. EC080610-09: AD006_20145
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Entry
AD006_20145 CDS
T04146
Name
(GenBank) ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AD006_20145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pseq02000
]
AD006_20145
Transporters [BR:
pseq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AD006_20145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
ABC_ATPase
AAA_22
SMC_N
TniB
Motif
Other DBs
NCBI-ProteinID:
ALL77043
LinkDB
All DBs
Position
4361227..4362240
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AA seq
337 aa
AA seq
DB search
MTAPAAPTRAGTLLGVDDLHVEFVTDHGWSTVVAGVSFDVREREIVGLVGESGSGKTVTG
LSVLGLLPRGVGRITSGAVRFGDRDLSELSGRELRAVRGNEVAMVFQEPMTSLNPAFRIG
DQIAETVRLHRGVSRRAARERAVEVLDLVGIPHARRRVDDYPHEFSGGMRQRAMIAMAVS
CEPRLLIADEPTTALDVTIQAQVLELLATMQRDLGMSVLLVTHDLGVVAEVCERVVVMYA
GQVVERAGVGELFDHPRHPYTEGLLAAMPQLGSRGQRLPSIPGRTPEPWAMPPGCRFAPR
CGRATTVCGEPPPLVTARPGHLSRCVRHDELTLRGAR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacctgccgcccccacccgtgccgggaccctgctcggcgtggacgacctgcac
gtcgagttcgtcaccgatcacgggtggtcgacggtcgtcgccggggtctcgttcgacgtg
cgcgagcgcgagatcgtcggcctcgtcggggagtcgggctcgggcaagaccgtgaccggc
ctgtccgtcctcgggctgctgccgcgcggcgtcggccggatcacctccggggccgtccgg
ttcggcgaccgcgacctgtccgagctctccggtcgggagctgcgggcggtgcgcggcaac
gaggtggcgatggtcttccaggagccgatgaccagcctcaacccggcgttccggatcggc
gaccagatcgccgagaccgtccggctgcaccgcggggtgtcccgccgggccgcacgcgaa
cgggccgtcgaggtgctcgacctggtcggcatcccgcacgcccggcgccgcgtggacgac
tacccgcacgagttctccggcgggatgcggcagcgggcgatgatcgcgatggcggtcagc
tgcgagccgcgcctgctgatcgccgacgagcccaccaccgcactcgacgtcaccatccag
gcccaggtgctggagctgctggcgacgatgcagcgcgatctcgggatgagcgtgctgctg
gtgacccacgatctcggcgtcgtcgccgaggtgtgcgaacgggtcgtcgtgatgtacgcc
gggcaggtcgtggagcgggccggggtcggtgagctgttcgaccatccgcgccacccctac
accgaggggttgctggcggcgatgccgcagctggggtcgagggggcagcggctgccgtcg
atcccggggcgcaccccggaaccgtgggcgatgcccccgggctgccggttcgcgccgcgc
tgcggccgtgcgacgacggtctgcggggaaccgccaccgctggtcaccgcccggcccggg
cacctctcccgctgcgtccggcacgacgagctgaccctgcgcggtgcccggtga
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