Pseudonocardia sp. EC080610-09: AD006_26080
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Entry
AD006_26080 CDS
T04146
Symbol
ligC
Name
(GenBank) ATP-dependent DNA ligase
Organism
pseq
Pseudonocardia sp. EC080610-09
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GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
LZ_Tnp_IS481
HTH_32
HTH_23
DUF3509
Motif
Other DBs
NCBI-ProteinID:
ALL77909
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Position
5664427..5665497
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AA seq
356 aa
AA seq
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MDLPVMPPVKPMLAKPASSIPDGRLYEPKWDGFRSIVFRDGDDVEIGSRNERPMTRYFPE
VVEAVRANFPDRAVIDGEIVVADPANNRLDFEALQQRIHPAASRVTLLSTETPASFVAFD
LLALGADDLTGLPFAERRDLLESALADAAPPVHLTPVTDDTGTARRWFDRFEGAGLDGLI
AKDPAGTYQPDKRVMTKIKHERTADCVVAGYRVHKSGPDAVGSLLLGLHDERGVLVSVGV
VGAFPMARRRELMTELQPLVTGFDEHPWAWAKQLEGERTPRKSETSRWNAGKDLSFVPLR
PERVVEVRYDYMEGARFRHTTQFVRWRPDRAPESCTYEQLDRPVGFDLAEVLAGRG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgcccgtgatgcccccggtgaagccgatgctcgccaagcccgcgtcgtcgatc
cccgacggccggctgtacgagcccaagtgggacggcttccgctcgatcgtcttccgggac
ggtgacgacgtcgagatcggctcccgcaacgagcggccgatgacgcgctacttccccgag
gtcgtcgaggcggtgcgggcgaacttcccggaccgcgcggtgatcgacggcgagatcgtc
gtcgcggaccccgcgaacaaccgcctcgacttcgaggcgctccagcagcggatccatccc
gccgcgagccgggtgacgctcctgtcgaccgagacgccggcgtcgttcgtggcgttcgac
ctgctcgcgctcggcgccgacgacctgaccgggctgccgttcgccgagcgtcgcgacctg
ctggagtccgcgctcgccgacgccgccccgccggtgcacctcacccccgtcaccgacgac
accggcaccgcccggcgctggttcgaccggttcgagggcgccgggctcgacggcctgatc
gcgaaggacccggcggggacctaccagccggacaagcgcgtcatgaccaagatcaagcac
gaacggaccgcggactgcgtcgtcgccgggtaccgggtgcacaagtccgggccggacgcc
gtcgggtcgctcctgctcggcctgcacgacgagcgcggggtgctggtgtcggtcggtgtc
gtcggcgcgttcccgatggcacgcagacgggagctgatgaccgagctccagccgctggtc
accggcttcgacgagcacccgtgggcctgggcgaagcagctcgagggcgagcgcaccccg
cgcaagtccgagacgagccgctggaacgccggcaaggacctctcgttcgtgccgctgcgc
ccggagcgggtcgtggaggtgcgctacgactacatggagggcgcccggttccggcacacc
acccagttcgtgcggtggcgcccggaccgcgccccggagtcgtgcacctacgaacagctg
gaccggccggtcgggttcgacctggccgaggtcctcgcgggccgcggctga
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