Pseudomonas sp. StFLB209: PSCI_2666
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Entry
PSCI_2666 CDS
T03623
Name
(GenBank) non-ribosomal peptide synthetase PvdD
Organism
pses
Pseudomonas sp. StFLB209
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
PP-binding
AMP-binding_C
PapA_C
Motif
Other DBs
NCBI-ProteinID:
BAP43368
UniProt:
A0A077LKQ4
LinkDB
All DBs
Position
2995584..3004841
Genome browser
AA seq
3085 aa
AA seq
DB search
MNAQDALKLARRFIELPQEKRRLFLEGLQQQGVDFALFPIPAEVLVDERDGLSYAQQRMW
FLWQLDPQSAAYNLPMAVRLNGELDNAALQSAFDALVARHETLRSQFSEQDGVVRQRIVE
PFAVSIARHDLSALDTDAREEQVRTLADAEALAPFDLAHGPLLRVQLLKLADQEHVLLLT
LHHIVADGWSYNVLIDEFIRLYDAASSGSDAALQPLPIQYRDYALWQRSWLEAGEQDRQL
DYWRAKLGDDHAPLELPIDHSRPVTPSYRGARHEFQVEPALAERLRGLAREQGVTLFMVL
LAAFKVLLHRYSGQQAIRVGVPVANRNRAEVEGLIGCFINTQVLHTEIDPLIDVRELLQR
VKETALGAQGHQELPFERLVEAFGLDRSLSISPLFQVMFNHQSQVADAGAIKGQSGLSIA
ALERETRIAQFDLSLDTYEKGGKLFAAFGYAMDLFDSRTVAQMAGHYSNLLLALATQPQA
RVCELVVLDDEQRRQIVQGWNATQVDYPLHRGVHQLIEAQAEQTPQAPALTFGAQTLSYA
ELNARANRLAHHLIAQSVQPDGLVGIAAERSLEMVVGLLAILKAGGAYVPLDPEYPTERL
AYMLEDSGIGLLLSQSHLQLPLSEGVQRIDLDQQGDMLAGLPDTNPQVLLTGEHLAYVIY
TSGSTGKPKGAGNRHSALTNRLCWMQQAYGLEASDSVMQKTPFSFDVSVWEFFWPLMTGA
RLVVAQPGAHRDPAQLVELINRENISTLHFVPSMLQAFLQDANVGSCHSLKRIVCSGEAL
PVDAQLQVFSMLPQAGLYNLYGPTEAAIDVTHWTCVDEGCDAVPIGLPISNLGCHVLDAN
LEPVPVGVLGELYLFGEGLARGYHQRPALTGERFVASPFADGARMYRTGDLARYRNDGVI
EYAGRIDHQVKLRGLRIELGEIEARLLEHESVRETAVLAVDGKHLVGYVVLAQQNDDWRE
ALAAYLAQSLPDYMVPAQWIDLAQMPLSPNGKLDRKALPRPDAGTAQTEYAAPQNGLEQR
IAEIWQDVLKREQIGRNDNFFELGGDSIVSIQVVSRARQAGIQFSPKDLFLHQTVRSLAA
VAETGTEVLLIDQGPAIGDVQLTPVQHWFFELPMSERQHWNQSLLLDAQQPIVAERLEQA
LQAVVQRHDALRLRYASEGGSWRQWYADVGTEQNLLWQGPDSEAFHDEVQRSLNLAEGPL
LRAALMDRPEGGQRLLLAIHHLVVDGVSWRILLEDLQIAYQGLALPAKTSSYQSWAARLE
ALVNTEQRQQELDGWLARLQGPIHELPRDNPDGGLLNKHGATLDIRLDAERTERLLKQAP
AAYRTQVNDLLLTALARVLCRWSGNESVLVQMEGHGREDLFDDIDLTRTVGWFTSLYPVK
LTPAAELSASLKAVKEQLRDVPEKGLGYGLLRYLGSPQTRQALAALPQPRVTFNYLGQFD
SQFDEKALFTPAGKGGGQAQADDAPLANWLSVEGQVYGGELSLRWGYSAEMYRAETIQRL
ADELVAELHAVIEHCTDTQTFAITPSDFPLAKLTQAQLDDLPVAARDIEDIYPLSPMQQG
MLFHTLYEQEGGDYINQMRVDVRGLDVERFRLAWQQTLAAHEILRSGFVWQTDAQNPHQI
VTRQVQLPWQEYDLCGQDNLQQSLTSLAKRELDAGFVLDRAPLLKVCLVRTEAQKHHLIL
TFHHLLLDGWSSSRLIDEVLQRYAGQPIPAPAGRYRHYIEWLQQQSSLHSKAFWQPRLEQ
LQGPTRLVQSLAPVADTVAQAGAGQSVHLRVDQTRTERLASFARQRRVTVNTLVQSAWLL
LLQRYTGQDCVAVGATVANRPAHLAGIEEQIGLFINTLPVIASPAPDMTVDQWLAHVQAL
NLELREHEHVPLFTLQGWFGHANEAMFDTLLVFENYPLSAAIDQSQKAGLCFGEVLNQER
TNYPLTLVVTLAQCLSIDFDYHPGVLSHGAVQALAAQLDSLLTQLGEDGGKALGTLELVA
TAPLDPLLQVSGLPSTAPVAWLHQLIERQALLAPDATALVVGQQQLTYAQLNSQANHLAK
LLIEQGAGPHRLVGIALPRSASLIVGLFAILKTGAGYVPLDLEYPAQRLAYMLEDSGVDL
ILGDEQASSLFSGADLRVLRVDQLALPSQGGCNPDVALSESHLFCLLYTSGSTGQPKGVL
LEHGALLRHLLTVQQFYRVERDDRVLHFASLNFDWGTEQWLLPLISGACCILRGEGLWSA
EQALDVIEQQKPSIVYFPTQYACQLAAFASSTGRRAAVRSFNVAGEGLAREGFEQIQSAL
QPDTIVNGYGPTETVITPFLWRANGATRITSAYAPIGTPIAGRSAFILAHGLAVQPVGVT
GELYIGGQSLACAYHRRAALTAERFVPDPFSQQPGARLYRSGDLVRQTESGQMEYIGRVD
HQVKIRGFRVETGEIEACLLGFAQVASAVVIAVPGPHGQQLAAYIVPHAAADAQQAVDHP
QLCATLREALSKTLPAYMQPTFWQVLESLPLSPNGKLNRQALPTPDVSLLQREYVAAQTD
LQRTLAQLWCEILGVQRVGLHDNFFELGGHSLLATQVISRVRHQLGIEVPLRALFRAEDL
LTFADVVQAASQAASQSGVSRVMPAMQRVDAAQPHPLSFAQQRLWFLWQMHPDSSMFNIS
RVLQLDGALNVDAVRGAFEVLLERHAVLRTTYSMVDGQSLQQVHPAVALPMVYQDLRDLP
AQQRELLVSQAQAENAHAPFDLINGPVLRIALVQTADEQSLLLVTLHHIVADYWSFTILM
REFVECYDAALSQRAAQLPPQAFSYLDFAVWQRQWLEAGESRRQLDYWSQVLGGDPTVTR
LPGSASPDIAAGTCDVQVFELSASLSRALREFGRSRGLTLYMVLLASFAMVVAQRCGTGR
VRLGTDVANRNHAAVEEVVGFFVNQLVLHLELDEHVSVEQWLQACSDAVVGASDHQDLPF
DRLVEALRLPRQGGRSPLFAIKFIYQESTAPAPQPQAIRLSHREPGQAVTEMDLIVEFVN
SEQGITAALKYDVSLYSKADMQDLYGGLQQGLELMIAEPQAPMSRLLEQIAERQAAVQQA
RATERHEQLKSQHPIRRRSRGVELQ
NT seq
9258 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccaagacgcactgaaacttgctcgccgctttatcgaactgcctcaggaaaaa
cgccgcctgtttctggaggggctgcaacagcaaggggtggactttgccctgttcccgatt
ccggccgaggtgttggtagacgagcgtgacgggctgtcttatgcccagcagcggatgtgg
ttcttgtggcagctcgacccgcagagcgccgcctacaacctgccgatggctgtgcgcctg
aacggcgagctggataacgccgctttacagagtgccttcgatgccttggtggctcggcat
gaaaccctgcgcagccagttcagtgaacaggatggcgtggtccgccagcggattgtcgag
ccgtttgcagtcagcattgcccgccatgatttgagtgccctggataccgacgctcgcgaa
gaacaggtccgcaccctcgccgatgccgaggccctggcgcctttcgatctggcccacggc
ccactgctgcgcgtgcagttgctcaaacttgccgatcaagagcatgtgctgctgctgacc
ctgcaccacatcgtcgccgacggctggtcgtataacgtgctgatcgacgaattcattcgc
ctctacgatgccgccagcagcggcagtgacgcagccctgcaaccgctgccgattcagtac
cgcgactacgccctgtggcagcgcagctggctggaggccggtgagcaggatcgccaactg
gactactggcgcgccaagctcggcgatgaccacgcaccactggaactgcccatcgaccac
tcgcgcccggtaacgccgagctatcgcggtgcgcgtcacgagtttcaggttgaaccggcc
ctggccgagcgcctgcgtggcctggcccgtgaacagggcgtgaccctgttcatggtgttg
ctggcggccttcaaggtactgctgcatcgctacagcggccagcaggcgatccgcgttggc
gtgccggtggccaaccgtaatcgggcggaagtggaagggctgattggttgctttatcaat
acccaagtgctgcataccgagattgatccgctgattgatgtgcgggagttattgcagcgg
gtcaaggagactgcgctgggtgcgcaggggcatcaggagttgccgtttgagcggttggtg
gaggctttcggtctggaccgcagcctgagcatcagcccgctgttccaggtgatgttcaac
caccagtcgcaggtggcggatgccggagcgatcaagggacagtccggcctgagtattgcg
gcgctggagcgggaaacgcggattgcccagtttgatttgtcgctggatacttacgagaag
ggcggcaagttgtttgcggccttcggctatgccatggatctgtttgacagtcgtaccgtg
gcgcaaatggccggtcactacagcaacctgttgttggctttggctacccagccgcaagcg
cgtgtctgcgagctggtagtactggacgatgagcagcgtcggcagatcgttcaaggttgg
aacgccacccaggtggattaccccttgcatcgcggtgtccatcaactgatcgaagcccaa
gccgagcaaacaccgcaggccccggccctgacgtttggcgcgcagaccctgagctacgcc
gagctcaatgcccgggccaaccgcctggcccaccatctgattgctcagagtgtgcagccc
gacgggctggtcggcatcgcggcggagcgctcgctggagatggtggttggccttttggcg
attctcaaggccggtggcgcttacgtgccgctggacccggagtacccgaccgagcgcttg
gcctacatgctggaggacagcggtatcggcctgctgttgagccagtcgcatctgcaattg
ccgctgagtgaaggcgtgcagcgtattgatctggaccaacaaggtgacatgctggccggt
ttgcccgacaccaatccgcaggtgttgctcaccggtgagcatttggcctacgtgatctac
acctctggctcgaccggcaagcccaagggggccggtaaccgccactctgcactcaccaac
cgtttgtgctggatgcagcaggcctatgggctggaggccagcgacagcgtgatgcagaag
accccgttcagctttgacgtatcggtgtgggaattcttctggccgctgatgaccggcgcc
cgtctggtggttgcgcaacccggcgcgcatcgtgatccggcgcaattggtcgagctgatc
aatcgtgaaaacatcagcacgctgcacttcgtaccctcgatgctgcaggctttcctgcag
gacgccaatgtcggctcctgccatagcttgaaacgcatcgtatgcagcggcgaggcgctg
ccggtggatgcccaactgcaggtattcagcatgctgccacaagcaggcctgtacaacctc
tacggcccgactgaagcggccatcgacgtgactcactggacctgtgtggacgaaggctgc
gatgcagtacctatcggtctgccgatttccaaccttggctgtcacgtgctggacgccaac
ctggagccggtaccggtcggtgtgctgggcgagctgtatctgtttggcgaaggcctggcg
cggggttaccaccagcgacccgcactgaccggcgagcgcttcgtggccagtcctttcgct
gatggggcgcggatgtatcgcaccggcgacctggcccgctaccgtaacgacggtgtgatc
gaatacgccggccgaatcgaccaccaggtcaaattgcgcggcctgcgtatcgagttgggc
gaaatcgaagcgcgcttgctggagcatgagtcggtgcgtgaaaccgctgtgctggcggtg
gatggcaagcatctggtgggctacgtggtgctggcgcagcagaacgatgactggcgtgag
gcgctggccgcgtatctggcccaaagcctgccggattacatggtgccggcacagtggatc
gaccttgcgcagatgccgctgagtcccaacggaaaactggaccgcaaagccctgccacga
cccgacgcaggcaccgcgcaaaccgaatatgccgccccgcaaaacggactggaacagcgc
attgccgagatctggcaagacgtgctcaagcgcgagcagatcggccgcaacgacaacttc
ttcgagctgggcggcgactccatcgtctccattcaggtcgtcagccgcgcacgccaggcc
ggcatccagttcagccccaaggacctgttcctgcaccagaccgtgcgcagcctggctgct
gtggctgaaaccggcaccgaagtcctgctgatcgatcaggggccggctattggtgacgta
cagctcacaccggtacaacactggttcttcgagctgccgatgtccgagcggcaacactgg
aaccagtcgctgctgctggacgcccagcaacccatcgttgcagaacggctggaacaggct
ctgcaagcggtggtgcagcggcatgatgcactgcgcctgcgttacgcatccgaaggaggt
agctggcgccagtggtatgccgatgttggcaccgagcagaacctgctttggcaggggcct
gatagtgaggctttccatgatgaggtgcagcgcagcctgaacctggccgaaggccccttg
cttcgcgccgcgctaatggaccgccctgagggtggtcagcgcctgttgttggccatccat
cacctggtggtggacggcgtgtcctggcggatcctgcttgaagacctgcagatcgcctat
cagggtttggcgctgccagccaagaccagctcataccaaagctgggcggcacgtcttgaa
gcgttggtaaacaccgagcagcgtcagcaagaactcgatggctggctggcccgactgcaa
ggtccgatacacgagttgccgcgtgataatccagacggcggcctgctgaacaagcatggc
gcaaccctggatatccgcttggatgccgaacgcactgagcgcttgctcaagcaggcgccc
gccgcataccgcacccaagtgaacgatctgttactcacagctctggcgcgcgtgctgtgc
cgctggagcggcaacgagtcggtgctggtgcagatggaagggcacggtcgtgaagacctg
ttcgacgacatcgacctgacccgcaccgtgggttggttcaccagcctgtatccggtgaaa
ctgacccccgctgctgagctttcagcctctttaaaagcagtgaaagaacaactgcgcgat
gtacctgaaaagggcctgggttacggcctgctgcgttatctgggtagcccgcaaacccgc
caggccctggcagcgctgccgcaaccccgtgtcaccttcaactacctggggcagttcgat
agccagttcgatgaaaaagccttgttcaccccagccggcaaaggcggcggccaggcccag
gcggacgatgcgccattggccaactggctcagcgttgaaggccaggtgtacggtggtgaa
ctgtcactgcgctggggctatagcgcagaaatgtaccgggcagaaaccatccagcgactg
gccgatgaactggttgctgagctgcatgcagtgattgagcattgcacggatacacagacc
tttgcgatcacgccgtctgacttcccgctggcgaaattgacccaggcgcaactggatgat
ctgccggttgctgctcgggatatcgaggatatctacccgctgtcaccgatgcagcagggc
atgttgttccataccctttatgaacaggaggggggggactatatcaatcagatgcgggtg
gatgtgcgggggcttgatgttgagcgttttcgtctggcatggcagcagaccctggccgct
cacgaaatcctacgcagtgggtttgtctggcagaccgatgcccagaatccgcatcagata
gtcacccgccaggtacaactgccgtggcaggagtacgacttgtgcgggcaggacaacctg
cagcagtcgctgacgagccttgccaaacgtgagctggatgcaggcttcgtgctcgacaga
gcgcctttgcttaaagtctgcctggtgcgtaccgaagctcagaagcatcacctgatcctg
acgtttcaccatctgctgctcgatggctggagcagctcgcggctgatcgatgaagtgctc
cagcgctatgctggccagccaatcccggcgccagccggacgctaccgtcactacatcgaa
tggctgcagcagcagagctcgctgcacagcaaggcgttctggcaaccgcggctggagcaa
ctgcaaggaccgacccggctggtccagagtctggcgcccgttgccgatactgtcgcgcag
gctggcgctggtcagagcgttcatttgcgtgtggaccaaacgcgcaccgagcgccttgcc
agttttgcccggcagcgacgggtgactgtcaataccctggtgcagtcggcatggctgctg
ctgttgcagcgctataccgggcaggactgtgtagctgttggggcaaccgtggctaaccgc
cccgcgcatctggccggaattgaagagcagatcgggctgttcatcaataccctcccggtg
attgccagtcctgcgccagacatgaccgtggaccaatggttggcgcatgtccaggcgctg
aatcttgagttgcgcgagcatgagcacgttccgctgttcaccctacagggctggttcggg
cacgcgaacgaggcgatgttcgacaccttgctggtttttgagaattacccgttgtcggcc
gccatcgaccagtctcagaaggccgggctgtgttttggtgaagtgctcaaccaggagcgc
accaactatccgctgacccttgtggtaacactggctcagtgcctgagcatcgactttgat
tatcatccgggcgtgttgagtcatggcgccgtgcaagccttggcggcgcagctcgactcg
ctgctcacgcaacttggcgaagacggcggcaaagccctgggcacccttgaactggtagcg
acagcaccgctcgatccgctgttgcaggtgtccggattgccgagtactgcgcccgtggca
tggctgcatcagttgattgagcgacaagcgttgctggcacctgatgccaccgcgttggtc
gtcggccagcagcaactgacctatgcgcagctcaatagccaggccaaccatctggcgaag
ctgctgatcgagcagggcgccgggccgcacaggctggtcggtatcgccttgcctcgcagt
gcgtcgttgatcgtggggttgttcgcgattctcaagaccggcgcaggttatgtgcccttg
gaccttgagtacccggcccagcgtctggcctacatgcttgaagacagcggggttgatctg
atcctgggggatgagcaggccagcagtttgttcagcggcgccgacctgcgtgtgttgcgt
gtcgaccagctggcgctgccttcgcagggcggctgtaatcccgatgtagcgctcagtgaa
agccacctgttctgcttgttgtatacctcaggctcgaccgggcagcccaagggcgtgctg
ttggagcatggtgcattgttgcgtcatctgttgacggttcagcagttctaccgcgtcgag
cgcgatgatcgggtgctgcatttcgcctcgttgaactttgactggggcaccgaacagtgg
ctgttgccgttgataagtggtgcctgttgtatcttgcgcggtgaagggttgtggagcgcc
gagcaggccctggacgttatcgagcagcaaaagcccagcatcgtctactttccgacgcag
tacgcctgccagttggcggcctttgccagcagcaccgggcgcagggccgctgtgcgctcg
ttcaatgttgccggcgaggggttggcgcgggagggctttgagcagattcagtctgccttg
cagcccgataccatcgtgaacggctacggtccgaccgaaaccgtcattaccccattcttg
tggcgggccaatggcgctacccgcattacctcagcctatgcgccgatcggcacaccgatt
gcgggccgcagtgcgttcattctggctcacgggttggcggtgcagcctgttggggtcacg
ggcgagctgtatatcggcggtcagtcgctggcctgcgcttatcatcggcgagcggcgctc
accgctgagcgttttgtgcctgatccgttttctcagcagccaggggcgcggctttatcgc
agcggcgacttggtccggcagaccgagagcggtcagatggaatacatcggccgggttgac
catcaggtaaagattcgtggttttcgtgtcgaaaccggcgagatagaagcctgcctgttg
ggctttgcgcaggtagccagcgctgtggtcatcgccgtgcctgggccgcacggtcagcaa
ttggcggcttacatcgtgccgcatgcagcagcggatgctcagcaggccgtcgaccatccg
cagctttgtgcaacgctgcgcgaagcactgtccaagacgctgcctgcctatatgcaacca
accttctggcaagtgctggagtctctgccgttgagccccaatggcaagctcaaccgccag
gcgctaccgacccccgatgtgagcctgttgcagcgtgaatacgtcgcggcacagaccgac
ctacagcgcaccctcgcgcagttgtggtgcgagattctcggcgtacagcgcgtcggtctg
catgacaacttcttcgaactgggcggtcattcgctgctggcgactcaggtgatcagccgg
gtacgtcaccagttgggcatcgaggtgccgctgcgtgcgctgttccgggcagaggatctg
ctgacatttgccgacgttgtgcaggctgcttcacaggccgcttctcagtccggcgtcagc
cgtgtgatgcctgcgatgcagcgggtcgatgcggcgcagcctcacccattgtcctttgcg
cagcagcgcctgtggtttctctggcagatgcatccggacagttcgatgttcaacatctct
cgcgtgctgcaactcgatggcgcgctgaacgtcgatgccgtgcggggggccttcgaagta
ctgcttgagcgtcatgcggtgctacgtacaacttactcgatggtcgatggccagagcctg
caacaggtgcatccggcagttgcactgcccatggtctaccaggatctgcgcgatttgccg
gcgcagcagcgcgagctgttggtcagtcaggcgcaggccgaaaatgcccacgcgcccttt
gatctgatcaacggtccggtattgcgcatcgcgctggtgcagacggcggacgaacagtcg
ctattgctggtaaccctgcatcacatcgttgctgattactggtcgttcacgatcctgatg
cgtgagttcgtcgaatgctatgacgcggcgctcagccaacgagctgcgcaattgccgccc
caggcgttcagctatctggactttgccgtgtggcagcgtcaatggctggaggccggtgaa
agccggcggcaactcgactactggagccaggtgctgggcggcgacccgacggtcacccgg
cttccaggctcggcatcgccggatattgcggccggtacgtgtgacgttcaagtgttcgag
ctgtcggcctcgctgtcccgggcgctgcgcgagttcggcaggtctcgtgggttgacgctg
tacatggtgttgctggccagctttgcgatggtcgtggcgcaacggtgtggcacgggcagg
gtgcgcttgggcacggatgtcgccaaccgtaatcacgctgccgttgaagaagtggtcggc
ttcttcgtcaatcagttggtactgcatcttgagctcgatgagcacgtcagtgtcgagcaa
tggttgcaagcgtgcagcgatgcggtggttggagcctccgaccatcaagatctgccgttc
gatcggttggtggaggctttgcgtctgcctcgtcagggcgggcgctcaccactgttcgcc
atcaagttcatttaccaggaaagcactgcgccggcgccgcaaccccaagcaatacgcctg
agccaccgcgagccgggccaggcggtcacggaaatggatctgatcgtggagtttgtcaac
agcgagcagggtattaccgcggcgctcaagtacgacgtcagcctgtactccaaggcggat
atgcaagatctgtatggcggattgcagcaagggcttgagttgatgatagccgagccgcaa
gcaccgatgtcgcggctgctggagcaaatcgccgagcgtcaggctgcagtgcagcaggca
cgtgccacggagcgccacgagcagctcaagtcgcagcatccgatccgccgccgcagccga
ggcgtcgagctgcagtag
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integrated database retrieval system
