Pseudomonas sp. TCU-HL1: THL1_3558
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Entry
THL1_3558 CDS
T05373
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pset03032
]
THL1_3558
03036 Chromosome and associated proteins [BR:
pset03036
]
THL1_3558
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_3558
DNA replication proteins [BR:
pset03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
THL1_3558
Chromosome and associated proteins [BR:
pset03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
THL1_3558
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
THL1_3558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Meth_synt_1
HrcA
Motif
Other DBs
NCBI-ProteinID:
AOE86106
UniProt:
A0A1B3E981
LinkDB
All DBs
Position
complement(3794149..3794451)
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AA seq
100 aa
AA seq
DB search
MGALTKAEMAERLYEELGLNKREAKELVELFFEEIRQALEHNEQVKLSGFGNFDLRDKRQ
RPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctgacgaaagctgagatggctgaacgtctttatgaagagcttggcctgaat
aaacgggaagccaaggaactggtggagctgttcttcgaggaaatccgtcaggcgctggag
cacaacgaacaggtgaagttgtccgggttcggcaatttcgacttgcgcgacaagcgtcag
cggcctggccgaaacccgaagaccggagaggaaatcccgatcacggctcgccgtgtggtc
actttccgtccagggcagaaactcaaagccagggtcgaagcttatgctggaaccaagtca
taa
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integrated database retrieval system
