Pseudomonas sp. TCU-HL1: THL1_4938
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Entry
THL1_4938 CDS
T05373
Name
(GenBank) recombination and repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_4938
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
THL1_4938
TLS (translesion DNA synthesis) factors
Other SOS response factors
THL1_4938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
Peptidase_M9_N
ABC_tran
RsgA_GTPase
NTPase_P4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOE87486
UniProt:
A0A1B3ED55
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All DBs
Position
5332160..5333833
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AA seq
557 aa
AA seq
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MLVHLSIHNYAIVEHLDLELEGGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD
KADILASFDVSSIAEARDWLAERDLEQDGPCILRRVITAEGRSRAYINGTPCPLGDLKSL
GELLIDIHGQHEHQSLLKADTHRRLLDEFAGSSDLARQVQLAAQRWRQTRQELERLSRAG
DEQRARHQLLSYQLDELENLALGENELEQLEQEHKNLTNAESLLAACRQVTDMCSESDAG
NVLSALTASLNRLTAFHAQPGALAEAVNLLSSAQIQVEEAMGELNRFLDHFDADPERQQT
LEERLDSIYTLARKHRVQPGELAELQQKLLDELEALNADDEAAERLAEELAAYERHYREK
AGELSQLRANAAGRLAGAVEAEMQRLGMPGGRFSIQLHAGQSEEPQQHGLEQLEFLVSAN
PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEVVGQLLRR
LGERGQVLTVTHLPQVAAQGHHHLFVHKERGTEETRTAVAKLQEALRIEEIARMLGGVDL
TEESLAHARKMVTSAQH
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctggtacacctgtcgatccacaactacgccatcgtcgaacacctggacctggagctc
gaaggcggcatgtccgtgatcaccggcgaaaccggcgccggcaagtcgatcatgctcgac
gcactcggcctgacgctgggcgatcgcgccgacagcggcgtggtgcgccccggcgccgac
aaggccgacatcctcgccagctttgatgtcagcagcattgccgaggcccgcgactggctt
gccgaacgcgatctcgaacaggatggcccgtgcatcttgcgtcgcgtaatcaccgccgaa
ggccgctcccgcgcctacatcaatggcaccccttgcccgctcggcgacctgaagagcctc
ggcgaactgctgattgatatccatggccagcacgaacaccagtccctgctcaaagccgac
acccatcgccgcctgctggacgaattcgccggttccagcgacctcgcccgccaggtgcag
ttggccgcccagcgctggcggcaaacccgccaggagctggaacgcctttcccgcgccggc
gatgaacagcgcgcccgccaccaactgctgagctaccagctggacgaactggagaacctc
gccctgggcgagaacgagctggaacagttggagcaagagcacaagaacctaaccaacgcg
gagagcctgctggccgcttgccggcaggtcaccgacatgtgcagcgagagcgatgccggc
aacgtgctcagcgccctgaccgccagcctcaatcgcctcaccgccttccacgcccagccc
ggcgcactggcagaggcggtcaatttgctctccagcgcacagatccaggtcgaggaagcc
atgggcgagctcaatcgcttcctcgatcatttcgacgccgatccggaacgccagcagaca
ctggaagaacgcctcgacagcatctacaccctggcgcgcaaacaccgggtccagccgggc
gagctggcagagcttcaacagaaactgctggatgaactggaagccctcaacgccgacgat
gaggccgccgagcgtctggccgaggaattggccgcctatgagcgtcactaccgggagaag
gccggcgaattgagtcagctgcgcgcaaatgcagccggacgactggccggagcagtggag
gcggaaatgcagcgcctgggcatgcccggcgggcgcttcagcatccagctgcacgccggc
caatcggaagagccccagcaacacggcctggaacaactggaattcctggtcagcgccaac
cccggccagccgctcaaggccctggccaaagtggcttccggtggcgagctgtcgcgtatc
agcctcgccattcaggtcatcactgcacagacctcccgcgtgcctaccctggtcttcgac
gaagtggacgtaggcatcggcggccccaccgccgaggtagtgggccagctgcttcgccgc
cttggcgagcgaggccaggtgctcaccgtcacccacctgccacaagtggccgcccaaggc
caccaccaccttttcgtgcacaaggagcgcggcaccgaagaaactcgcaccgcagtggcc
aagcttcaggaggctctccgcatcgaagagatcgcccggatgctgggtggcgtcgacctt
accgaggagtccctggcccacgccagaaagatggtgaccagcgcccagcactga
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