Polypterus senegalus (gray bichir): 120529430
Help
Entry
120529430 CDS
T08668
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like
KO
K09273
upstream-binding transcription factor
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120529430 (ubtfl)
03021 Transcription machinery [BR:
psex03021
]
120529430 (ubtfl)
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120529430 (ubtfl)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120529430 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
Motif
Other DBs
NCBI-GeneID:
120529430
NCBI-ProteinID:
XP_039609148
LinkDB
All DBs
Position
5:complement(108504214..108546045)
Genome browser
AA seq
697 aa
AA seq
DB search
MNGNSSLSNSTRTSLKTEDTEEWSKEDCLILLERIRSLLPEGDGMKYKTTESHFDWEKVR
FGDFTGDMCKQKWQKVACEVRKYRTMTELIMDAIEFVKNPYKGKKLKTHPDFPKKPLTPY
FRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKMKYIQEFQREKESFGKSMAKF
KEEHPELMEERKKSDLPEKPKTPQQHWYNHEKKSYLKLHPDVSQKELKEALRRQWSQLSD
KKRLKWISKALELQKDYEESMRAYHEAHPELLQDDHVKSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMNQKEKDMFQKRCEQKKKQYEVDLQRF
LESLPEEERERVLTEEKLGGSKLQVGNSGSPLRAKSPPSKDKSRDVERVLQEQRVDGLVK
EKRDKKRTRLPDTPKTAEEMWQQSVIGDYLAKYRNDRKKAQAAMEAAWKAMEKKEKIPWI
KKAAEDQKRYDRELLEMRLPLNAQAQRKPKFDGEPKKPPVSGYQMFSQELLTNGELNHFS
LKERMVEIGKRWHKLSQNQKDKYKKLVEEQQTEYKAEHEAWIKSLSPQERAAYKEFSSAK
RRGTSKAGGPPAKARITGKTKPETSESEEDEEKSDSSDSEEEDDDSSGSSDSDEEEDEND
EDDEDDDDDDEENEDEDDQSEATSSSSSDDSSDSDSD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaactcaagcctgtccaacagtactcggacatctttaaagactgaagacaca
gaagagtggagcaaggaagattgcttaatcctcctggagcgaatccggagcctgctgcct
gaaggggatggcatgaagtacaaaactacagagtcacactttgactgggagaaagttcgt
tttggggacttcaccggggacatgtgcaaacagaaatggcaaaaagtggcttgtgaggta
agaaaataccgaacaatgacagagctcattatggatgctattgagtttgtgaagaatcct
tataaaggcaagaaactgaagactcacccagactttccaaagaagcccttaactccatac
tttcgctttttcatggagaaacgagccaagtatgccaaaatccatccagagatgagtaat
ctggatctcactaaaattctttccaagaagtataaggaactgcctgagaagaaaaagatg
aaatacattcaggagtttcagagagaaaaagagtcctttggaaagagcatggccaaattc
aaagaggagcatcctgagctgatggaagagagaaaaaagtcagatctaccagagaaacct
aagactcctcaacagcattggtacaatcatgaaaagaagtcctatctgaagctacaccct
gatgtaagtcagaaagagctaaaggaagccctgcgccggcagtggtcacagctatctgat
aaaaagcgcctaaaatggatcagcaaggctctggaactgcaaaaagactatgaggagagt
atgcgcgcctaccatgaagcacatcctgagttgctccaagatgaccatgtaaagtctgtg
ctaaccaaagctgagcggcaactgaaagacaagtttgatgggcgaccaacaaaaccccca
ccaaatggctactccttgtattgtgctgagctaatggtgaatatgaaggatgtccccagc
actgaaagaatggtactttgcagcaaacagtggaaaatgatgaatcagaaggaaaaggat
atgtttcagaaacgctgtgaacagaaaaagaaacagtatgaagttgatcttcagagattt
ttagagagtttgccagaagaagaacgtgagcgggtgctgacagaggagaagctgggtggt
agcaagctacaagtgggaaattctggaagtcctctgcgggcaaagtctcctccatctaag
gacaaaagtcgtgatgtagaacgagtgctgcaagagcagagggtggatggtctggttaaa
gaaaagcgagataagaaaaggacacggcttccagacacacctaagacagcagaggaaatg
tggcaacagagtgttattggggactacttggcaaaatatcggaatgatagaaagaaagca
caggcagcaatggaggcggcctggaaagccatggagaaaaaagagaaaattccttggata
aagaaggcagctgaagaccagaagcgatatgatagggagctgctagagatgaggttgcct
ttgaatgcccaagcccagaggaagcctaaatttgacggggagcccaaaaagccacctgtg
agtggctatcaaatgttctcgcaagagctgcttacaaatggtgagctgaaccacttcagc
ttgaaggagagaatggttgaaattggcaagcgctggcacaaactgagccaaaaccagaag
gacaagtacaagaagctggtagaggagcagcagacagagtacaaggctgagcatgaggct
tggatcaaatctctctccccacaagagcgagccgcatacaaagagttctcttctgcgaaa
cgcagagggacatccaaagcaggtggtccaccagccaaagcccgtataacagggaagacc
aaacctgaaacgtcagaatcagaggaagatgaagaaaagtcagacagctcagattcagag
gaagaagatgatgactcttcaggttcttcagacagtgatgaagaggaggatgagaatgat
gaagacgatgaagatgacgacgatgatgatgaggaaaatgaggatgaagatgaccaatca
gaagcaacaagcagttcctcttcagatgacagctctgattctgactcggactaa
DBGET
integrated database retrieval system
