KEGG   Polypterus senegalus (gray bichir): 120533551
Entry
120533551         CDS       T08668                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120533551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psex03041]
    120533551
Spliceosome [BR:psex03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120533551
 Complex B
    120533551
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 120533551
NCBI-ProteinID: XP_039616420
LinkDB
Position
1:148861350..148949551
AA seq 983 aa
MADKAPGSAQKASNKTLLESKLKSFSIGKMSAAKRTLSKKEQEEIKKKEDERAAAEIYEE
FLAAFEGSDGSKVKAFVRGGIANASKEEVEADEKKGKLYKPTSRFLESKSNFQSEKHHQH
SSSGERKSVSNTAKKSDKEKKKSNLELFKEELKQIQEERDERHKMKGRISRFEPLPSDVD
SQRRSSDGSSRRNRPSSVLDDSAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP
LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKHLNGKMIMSFEMKLGWGKAVPIP
PHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPAAPLLPPPKNKEEFDKTLSQAIVKV
VIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQSPAHVYYRWKLYT
ILQGDSPNKWRTEDFRMFKSGSLWRPPPLNPYLHGTADEQEKETLEEPSKKGSLKEEQRD
KLEELLRGLTPRKNDVGDAMVFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFESKLCQIFSDLNATYRSIQGHLQSENFKQRVMSCFRAWEDW
AVYPEPFLIKLQNIFLGLVNLVGDKDTIANPVPAAILEIPDIVEDIDGAPIEDELDGAPL
DDVDGVPIDGSAIDGAPIDDLDGIPIKSIDDDLDGVPLMELPGQTKEPAFKMAPSKWEAV
DESELESQAVTTSKWEVFDQPEESEEEQKKEEEESEDEEDTRSSHSEEQQLYSNPIKDDL
SESKSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSIQEQIEHYRDKLLQR
VCEQEKEKEMEREKDRDKKDKDKIEPRSKEKKEKDETPTRKERKRRHSGSVSPARSGRRG
KSPSPRSERSERSHVKENSRSRSSHKDSPRDTSKKSKRSPSASRTPKRSRRSRSRTPKKS
GKKSRSSSRSPHRSHKKSKKNKH
NT seq 2952 nt   +upstreamnt  +downstreamnt
atggccgataaagcgccagggtctgcgcagaaagccagcaacaagactttgttggagagc
aaactgaaatcatttagcattggcaagatgtctgcagcaaaaagaactctcagcaaaaag
gaacaagaagaaattaaaaagaaggaagatgagagagcagctgcagagatctatgaagaa
ttcctggctgcttttgaaggttctgatgggagtaaagtgaaggcctttgttagaggagga
attgcaaatgcttctaaagaggaagtcgaggcagatgaaaagaagggtaaattatacaaa
ccaacatctagatttttggaatcgaaaagtaactttcaatccgagaaacatcatcagcat
tcttcttcaggggaaagaaaatctgtaagtaatactgccaaaaaaagtgacaaggaaaag
aaaaagagcaatttagagctatttaaagaagagttaaaacaaattcaagaagagagagac
gagcgacataaaatgaagggccggataagtcgatttgaacctctgccttctgatgtggac
tctcaacgcagatcctcggatggttcttcacgaagaaatcgtccatccagtgtacttgat
gactctgctcctggttcacatgatgttggagacccttctacaactaatttgtatcttgga
aatattaatcctcagatgaatgaagaaatgctttgtcaagagtttggccggtttggtccc
ttggccagtgtgaagataatgtggcctcgcacagatgaagagagggcaagagaaagaaat
tgtggctttgttgcatttatgaacagacgggatgctgaaagagctttaaagcatttaaat
ggaaagatgataatgtcatttgaaatgaaattgggctggggaaaagctgtaccaatacca
ccccatccaatatatattccaccttcaatgatggaacacacactaccaccccctccatca
ggcctgccatttaatgctcagccaagggagaggttgaaaaatcctgcagctcctttgttg
cctcctcctaaaaataaagaggagtttgataagactctgtcgcaagccatagtcaaagtg
gttatcccaacagaaaggaatttactttctttgattcaccgaatgattgaatttgtggtg
cgtgaaggacccatgtttgaagccatgataatgaacagagaaataaataaccccatgttc
aggtttctttttgagaatcaaagtcctgcccatgtttactataggtggaagttatatacc
attttgcagggtgactctccgaataaatggaggacagaagattttcgaatgttcaaaagt
gggtcattgtggaggcccccacctttaaatccatacttgcatggtacagcagatgaacaa
gagaaggaaactttggaagagccaagcaagaaaggatcacttaaagaagagcaaagggac
aaactggaagaacttctacgtggtctaacgcctcgaaaaaatgatgttggtgacgctatg
gttttttgtttaaatcatgctgaagctgcagaagaaatagttgaatgtattgcagagtct
ctgtctatcttgaaaactccattgccaaaaaagattgcacgcttatatttggtatcagat
gttttatataattcttctgctaaagttgccaatgcttcatattaccggaaattctttgaa
tcaaaattatgccagatattttcagacctcaatgcaacgtatcggtcaatacaaggtcac
ctccagtcagaaaactttaagcaaagagttatgtcgtgcttccgtgcatgggaagattgg
gcagtttatcctgagccttttctcatcaaacttcagaacatatttcttggtctggtaaat
cttgtaggtgacaaggacaccattgccaatcctgtaccggctgcaattttggagattcca
gatattgtagaagacattgacggagcaccaattgaagatgaacttgatggtgcacctctt
gatgatgtcgacggtgttcctatagatggatcagccattgacggagcacccattgatgat
ttagatgggattcccataaaatcaatagatgatgacctggatggtgtacctttaatggag
ttgcctgggcaaactaaggaacctgcatttaaaatggccccttctaagtgggaagcagtg
gatgaatcagagcttgaatctcaggctgttacaacatcaaagtgggaagtatttgaccag
cctgaagagtctgaagaagagcagaaaaaggaggaagaggaaagtgaagatgaagaggat
acaagaagttcacattcagaagagcaacagctttattcaaatcctataaaagatgatttg
tctgaatctaaatctgtcaagtattcagaaatgagtgaggaaaagcgggcaaagctgcga
gaaattgaattgaaagttatgaagttccaggatgaattagaatctggaaaaagaccaaaa
aaacctggacagagtattcaggaacaaatagaacactaccgtgacaagttattgcaaagg
gtttgtgaacaggaaaaagaaaaggaaatggagagagaaaaagatcgggacaaaaaagac
aaagacaaaatagagcctcgttctaaagaaaagaaggaaaaagatgaaacaccaacacga
aaggaaagaaaacgtcggcacagtggttctgtaagtcctgcacgcagcggtaggagagga
aagtccccatctccacggtctgagcgctctgagagatcacatgtaaaagaaaattctcga
tccagatcttcccataaagattctcctagagataccagcaaaaaatcaaaaaggtcgcca
tcagcttctaggacaccgaagaggtcgcgaaggtcacgttcaagaacacctaaaaagtcc
ggcaaaaaatccaggtccagctctaggtctccacatcggtctcacaaaaaatcaaaaaaa
aataaacactga

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