Polypterus senegalus (gray bichir): 120541053
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Entry
120541053 CDS
T08668
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120541053
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
120541053
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
120541053
NCBI-ProteinID:
XP_039628252
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Position
12:complement(74997519..75151833)
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AA seq
2163 aa
AA seq
DB search
MTASANWVANGASLEDCHSNLFSLAELTGIKWRRYRFRGNGECGPVISAPAHDDPVLRSF
TRCVHANLLCVWRRYVKPDAKPDAKELWIFWWGEEPNLVDIIHHELEVAEEGLWESGLSY
ECRTLLFKAIHNLLERCLMDKRFVRIGKWFVKPYEKEEKTANNSEHLSCAFTFFLHGESN
VCTSVEIAQHQPVYLINEEHITFAQNASSPFQVILSPYGLSGTLTGQAYKMSDPAVRKLM
EEWCYFYPMVLQKQEGKKEECELGYDSSSHVAVEVIVGGVRMVYPSAFVLIAQSDIPQAQ
PLSAQGVMREPTSCGIPLTPPTSPEQTCTGESGIQTVLNGLPPQEGIVGNTYSPKHTGKT
LTNQAVQHVWKECYMNTCQYKVTVSGDMNPDEVVSNGAPEWSFMSPAGRVSCCCSRQKLQ
KQRQPPAVSRTSSNPPLGSNPAPPATAPLPPPAPSKHKVLDKVDKLEKQPKRLLMTPFHH
RASVCEDFSLDQDPASAGTQKLAITTVDPPMEVLPGRKYPKQLQAPGKAPDSPMHSPVSP
LPPTLSPHPRSQDTEGLETAVSLPVYHELPPGPKPPEPSDTTLYAAPLATGKEGTGWWRD
FVVPMAEGTEFRPPELHADRAEVKVEAATEGIALKRLFAQPYKRFKVSEDRVREHVQSLG
YLDHTSVEGRVDICDPGDPYTFVDEDIEYRFTNKRGKGPCQDRDPSKKGKAEDGFNSREA
TPSNSTPVPDGKDAMSIFSPAPKSEDSRQDSASAKANPSLTRETDLVVLISDLENIFDNS
DEDELGATSSTQRLSKPPPAEDRPLGKDVKAAVPYPPTVADLQRMFPTPPSLEQHPAFSP
VMTYRDVLNSEPPSSLTAVDNTIASGIHLSEFKMEVEEGLASPKPEEIKDFSFVFQPLPL
QPVVGSSMFAPLRTLPSQCLPPIKLPESCFYRPSWSVPPKMEQLPPLPQHASFTRDGYVN
VPSVGSPLEQDYTQMSTPQTSTPAAANSTASASNAGVLPSPSPATPRFSVPTPRTPRTPR
TPRAGGPASGQGSVKYDGTDLCSPASTPSTSRPLSSVEPSALPPLPEAHSLYVVLILSDS
VLNIFKDRNFDSCCICACNMNVKGADVGLYIPDSTREDQYPCMCGFSAIVNRRLAHGAGL
FLEDELDIFGRGSEVGQAAERRLALCRRTSPEPPTPLLILLQEQCSRPLYSLSSLDQSAA
CSCPGRQGALAQSWAADKLWADSSDLCEECFNALEQGQQYVDNPAGGKVNRVLVRSSGLH
PWSHTSVLDISMLSSQDVVHMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKM
AGRGSYGSDESPEPLPIPTLLVGYDRDFLTLSPLALPFWEKLLLEPYGGQRDAAFLVVCP
DNDALIDGANNFFRDLSAVYETCRLGKHRPLSKISRDGIIRVGSLDSQHLAEEPEDEWIA
QPWGSDGEDDNLSKLRLYAHTCRNQLAPQLATLSLDSSLLLPPKPQPVAAANQASSGLLP
PPPPPPPPPPSAGAAGTTVGSTVTPVSTASGASQPSLPVVGGSQGQNGAERTQGNSTAGS
VAAPEAENGQNSTPAAPAAAAATTAPPPPPPPPPQEGQENSAERERIGIPTEADSADSHA
HPPAIVVYVVDPFLCSAEEEEAEPGSVWLLGLLRCYTDVLQSLPEALRPALVLQVVPCQY
LLQPVKDDHMHYIQQLRSLAFSVYSQCRRLLPVQTHIKSLTGFGPASTIENILKNPEQHP
CPLPLYSPPFVLSPMRNKQPELGEAAGEAMQHFGVLFVGYCLSHDQRWLLASCTDQHGEL
LETCVINIDIPNRARRTKVSARKMGLQKVWDWCVGIIQMTSLPWRVVIGRLGRLGHGELK
DWSILLGESSLQSITRQLKETCRICGISPSDSPSILSACLVAMEPQGSFVVMPDAVTMGS
VFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTSETYTSEDNPGAAVLSPSDDMFYLP
FPDELENYIESEMMLITRNLHPSPNSSPVPSPGSPSGIGGGCHFQQSRGQGERLLSREAP
EELKQQPLALGYYVSTAKAEDLPQWFWASCPQAQYQCPLFLKASLHHHISIAHMDELAAN
KNSQRTSHPLDSKITSEVLRFVLEQYNALSWLTCSPASQDRRSCLPVHFVVLTQMYNAIL
NML
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatcagcgaactgggtggcaaacggggcgagcctcgaagactgccactccaac
ctcttctctctggcggagctgactggcataaagtggaggcggtacagattccgaggaaac
ggcgagtgtggtccggtgatctctgctcccgctcacgatgaccccgtcctccgcagcttc
actcgctgcgtgcatgccaacctgctctgtgtctggcgccgctacgtcaagcccgatgcc
aagcctgatgccaaggagctgtggattttctggtggggcgaggagccaaacctcgtcgac
atcattcatcacgagctggaggtggcagaggaaggtctctgggaaagtgggctttcttac
gagtgccggacgttgctcttcaaggccatccataacctgcttgagaggtgcctgatggat
aaacgttttgttcggatcgggaagtggtttgtgaagccgtacgagaaagaagagaaaacg
gcaaacaacagtgagcacctgtcctgcgccttcaccttcttcctccatggagagagcaat
gtttgcacgagcgtggagatcgctcagcaccagccagtgtacctcatcaacgaggagcac
atcacctttgcccagaatgcctcttcccccttccaagtgatactaagcccctacggcttg
agtgggaccctgacgggccaagcgtacaagatgtccgaccccgccgtccgtaagctaatg
gaggaatggtgctacttctatccaatggtgctgcagaaacaagaaggcaagaaggaggag
tgcgagcttggctatgacagcagcagtcatgtcgctgttgaagtcatcgtcggtggcgtg
cggatggtctatccctcggcctttgtcctcatcgctcagagtgacatccctcaggctcag
ccgttatctgcacagggggtgatgagggagcccaccagctgcggcatccccctgacgccc
cccacgtctcccgagcagacctgtacaggtgaaagtgggatccagactgtcctcaatggt
cttccacctcaagagggaatcgttgggaacacatacagcccgaagcacaccgggaagacg
ctgaccaatcaggcggtccagcatgtgtggaaggagtgttacatgaacacgtgtcagtac
aaggtgactgtatctggtgacatgaaccccgatgaggttgtgtcaaatggagcgccagag
tggagcttcatgagtcctgcgggacgtgtgtcttgctgctgctccaggcaaaagttacag
aagcagcgacaaccgcctgcagtcagtcggacttcatccaaccctcctctgggctccaac
ccagcgcccccagccacagcacctctaccaccgcccgctccgtccaagcacaaggtgtta
gacaaggttgacaagctcgagaagcagcccaagagactgctcatgacccctttccatcac
agagcctctgtgtgtgaagactttagcctggaccaggaccctgcttcggcgggcactcag
aagctggccattaccacagtggaccccccaatggaagtgttgccaggccgaaaatatcca
aaacagctgcaagctccaggcaaagctccagattcccccatgcactcccccgtctccccc
cttccacccactctcagcccacatccccgaagtcaagacaccgaggggctcgagacagca
gtaagtctgccagtgtaccatgaactgccacccgggcccaagccgcctgaaccaagtgat
accacgttatatgccgcccccttagctactggcaaagagggcacaggctggtggcgagac
tttgtggtccccatggcggaaggtacggaattcaggccaccagagctgcacgcagacagg
gccgaggtgaaggtggaggctgctacagaaggcattgcactaaagaggctctttgctcag
ccttacaagcggttcaaggtgtcggaggaccgcgtacgagaacacgtgcagtctctcggc
tacttggaccacaccagcgtagaaggccgagtggacatctgtgaccctggcgacccgtac
acctttgtggatgaggacatcgagtacaggttcaccaacaagagagggaaggggccgtgt
caagacagagaccccagcaagaagggaaaggctgaagacggctttaattccagggaggca
acgccaagcaactctaccccagtgcctgatgggaaggatgccatgtccattttcagtcct
gctcctaaatcagaagactcgcggcaggacagcgcttcagccaaagcaaaccccagcctg
acaagggagacggacctcgtggtcctcatatcagacctggagaatatatttgacaactcg
gacgaggatgagctgggggcaacatcttctacgcagcgattgtccaagcccccgccagca
gaggatcgccccctcgggaaggacgtgaaggcggcagtaccatatccaccaacagtggca
gatcttcagaggatgttccccacgccgccctctctggaacagcatcctgccttctccccc
gtcatgacctaccgcgacgtcctcaactcggagccgcctagcagcctgacggctgtagat
aacaccatcgcttctggcatccacctgtctgagttcaaaatggaagtcgaggaggggctg
gccagtccaaagcccgaggagatcaaggacttttcctttgtttttcaaccactcccattg
cagccagtggtgggttcttccatgtttgcccctttaaggaccctgcccagccaatgtctg
cccccaatcaagttgccagagtcctgcttctaccgtccatcctggtctgtgccgcccaag
atggagcagcttccacccctgccacaacatgcttccttcacgagagatggatacgtaaat
gtgcctagtgtgggaagccccctggagcaggactacacccaaatgagcacccctcagacc
agcacgccggcagccgccaacagcactgcctctgccagcaatgcgggggtcctgccttct
ccctcacccgccactccgcgcttctctgtgcccacgccccgcactccaagaactccccgt
acgcccagggcgggggggccggccagcggccagggctcggtcaagtacgacgggacagac
ctctgctctccggcctccactccttccactagccgtcctctcagctccgtcgagccctca
gccttgccgcccctgcccgaggctcacagcctctacgtggtgctcatcctctcggactcc
gtgctcaacatcttcaaggaccgcaattttgacagctgctgcatctgtgcctgcaatatg
aacgtcaaaggagccgacgtggggctctacatcccggactccacgcgcgaggaccagtac
ccctgcatgtgtggcttcagtgccatcgtcaaccgccgccttgcccacggcgctggcctc
ttcctggaggacgagctcgatatctttggccgaggctccgaggtgggccaggcagcagag
agaaggctggcgctgtgccgacggacgtcccccgagccccctacgccgctgctcattctg
ctgcaggagcagtgctcccggcctctctattccctgagctctctggaccagtcggccgcc
tgctcctgtcccggccgacagggggcgctggcccagagctgggcggcagacaagctgtgg
gcagacagcagcgacttgtgtgaggagtgcttcaatgccctcgagcagggccagcagtat
gtggacaatccagccggggggaaagtgaatcgagtgcttgtgaggagcagcggccttcat
ccctggtcacacacaagcgtattggacatcagtatgctgtcctctcaggacgtcgtccac
atgcttctgtcccttcaaccattcctccaagatgccatccagaagaaacgcactggccgg
acatgggagaacattcagcatgtgcagggccctctgacctggcagcagttccacaagatg
gctgggcgaggctcttatggttcagacgagtcccctgagcccctgcctatccccaccttg
ctagtgggctatgaccgagacttcctgacgctgtctccactggcgctgcccttttgggag
aagcttcttctggagccatatggaggtcagcgagatgcggctttcctagtcgtttgtccg
gacaacgatgccctgatcgatggtgccaataatttcttccgggacctcagcgcggtgtac
gagacatgccggctggggaaacaccgcccacttagcaagatctcacgagatggcattata
cgggtgggcagcctggactcccagcaccttgccgaggagccggaagatgaatggattgca
cagccgtggggcagcgatggagaggacgacaacctgagcaaactgcgactttacgcccac
acctgcagaaatcagctggcccctcagcttgccaccctctcgttagacagcagtcttctt
ctacctccaaaaccacagcctgtggctgccgccaaccaagcctcatcaggcctacttcct
cctcctcctcctcctcctccacctcctccttctgcaggagctgccggtacgacggtagga
tccacagtcactcctgtttccacggccagtggtgcatcccagccatccttacccgtggtg
ggcggcagccaggggcagaatggggcagaacgcacccaaggaaactccacggctggcagc
gttgcggctccagaggcagaaaacggacaaaactcaacaccagcagcaccagcagccgcc
gctgccaccacagctcctcctcctcctcctcctcctcctcctcaagaagggcaagaaaat
tcggctgagagggaacgaatcggaatccccacagaagcagattctgccgatagccacgct
cacccgccagccattgtggtttatgtggtggacccgttcctgtgctccgcagaggaagag
gaggccgagcccggcagcgtctggctgctcggacttctccgctgctacacggacgtcctg
cagagtctgccggaggccctgcggccggcactggtgttgcaggtggtgccgtgccagtat
ctgctgcagcccgtgaaggacgaccacatgcactatatccagcagctgcgctccctggca
ttctcagtgtactctcagtgccgccgactgcttcccgtgcagacgcatatcaagtccctg
acgggctttgggcctgcgtctaccattgagaacattctgaagaacccagagcagcacccc
tgcccactgccattgtactccccaccttttgtcctaagcccgatgcgcaacaagcaacca
gaattgggagaagcagccggggaggccatgcagcactttggcgtgctgtttgtgggttac
tgcctgtcccatgaccagcgctggctcctggcatcctgtacggatcagcatggcgagctg
ctagagacatgtgtcatcaacattgacatcccgaacagggcacgtaggaccaaggtgtct
gctcggaaaatgggcctgcagaaggtgtgggactggtgcgttggcattatccaaatgaca
tcactgccctggcgagtggtaattggccgactaggtcgcttaggccatggcgagctaaaa
gactggagcattcttctgggggaaagttctctgcagtccattacacggcagctgaaggaa
acgtgtcggatatgtgggatctcccccagcgactcgccttccattctgagtgcctgcctt
gtggcaatggagccccaggggtccttcgtggtaatgccagacgctgtgacgatgggctct
gtgtttggccgcagtacggctctcaacttgcaaacctcccagctgaacacaccacaagac
gcatcgtgcactcacatcctggtcttcccaacctctgccaccacgtcggagacctacacc
agcgaagataaccctggcgctgctgttctgtctccatcagatgacatgttttacctccct
tttcccgacgaactggagaactacattgaaagtgaaatgatgctgatcaccaggaacctg
catccttctcccaactcctcccctgtcccatccccagggtctccttctgggattggtggg
ggttgccacttccagcagagccggggtcaaggtgagcggcttctatcccgggaggcccca
gaagaactgaagcagcagccgctggctcttggttactatgtgtccactgccaaagctgaa
gaccttccccagtggttttgggcatcctgcccacaggctcaatatcagtgtcccctgttc
ctcaaggcctcactacaccaccatatctcgattgctcatatggacgaacttgctgcaaat
aagaattcccaaaggacgtcacatcccctggactccaagattacctcagaggtgttaagg
tttgtgctggagcagtacaacgccctctcctggctcacctgcagcccagcatcccaggac
cgccgctcctgcctgccggtccactttgttgtcctgacacagatgtacaacgccatcctg
aacatgctctag
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