Polypterus senegalus (gray bichir): 120542370
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Entry
120542370 CDS
T08668
Symbol
rbm27
Name
(RefSeq) RNA-binding protein 27 isoform X1
KO
K13193
RNA-binding protein 27
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120542370 (rbm27)
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120542370 (rbm27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Nup35_RRM_2
Nup35_RRM
zf-CCCH
ERM_helical
DUF1866
zf_CCCH_4
FapA
Epimerase_2
Motif
Other DBs
NCBI-GeneID:
120542370
NCBI-ProteinID:
XP_039630711
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All DBs
Position
13:complement(44431149..44522948)
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AA seq
944 aa
AA seq
DB search
MIIENVEALKSWLAKLLEPICEADPSALANYVVALVKKDKPEKDLKALCADQLDVFLQKE
TTGFVDKLFECLTTKHYLGNQDQYVKETAKEEVKAVDVKMEHNRDEPVSNFEEERDTRRK
KSPLRNRPDFNELRNREDKRRDERKRREGDRPHKNADIYRERYDRRRGSSRSRSRSRSGS
RGKTLDKDHNRIKDHRLKFEMDRREPEGYVPSSVPTCIPVQHQYSSGGHAIPSAVTVVAP
AHLPDSTTESWSNYFSNHSDSKPFHRNIPQKRRCRDYDEKGFCVRGDLCLYDHGNDPLIV
DDVTLPTMIPFPPPPGIPPPRLPVPPMPVPPPNLRLPLPHPPPPPPPPPPPHGQPPPPGM
FPMPDNYDPEAYNPEAPGITATSRPPYRQFIPRIQTQRSNLIGLTSSDMDTPGSRAANIV
IQTEPNASSVTNNNLPRYNSDQDSNRKRALSSGDGPPSKKPWIEKQNFNNQHKPGFQKKN
HYANTRLEVRKIPRDLNNIAKLNEHFSKFGTIVNIQVVFGGDPEAAMIQYTTNEEARRAI
SSTEAVLNNRFIRVYWHRDNNEQSQQTQQNQTQVSPVIPQHTNVHKVVNKPHNPGSYILN
KVSAKHRIGAAVLNKAEALRTTDAVEVVNSAPSPLKAPFTSASVKVIPKPIVKSSSKVLE
VQDALKKKQQDTIKLQQDMRKKQQEMLEKQIECQKVLINRLEKNKNMKPEERANIMKTLK
ELTNKISQLKDELKPISNAPGKSIQPKTKIDAQKELLDAELDFHKKLSSGEDTTDLKRKL
NQLQIEAARLGLIPGGRGKIAQGRGRGRGRGRSSRGRGVANHMVVDHRPRALAVLGVTKE
EKDELMPHFTKFGEVEDLHDHDPTGMVVTFRTRSEAENAANQGAKFKGRTLQISWYKPKT
PSVSTEPEEEETKEEDTERALLLPEEEEEDDEDEDEEKSRSWRR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgataatagagaatgtagaagctttgaagtcttggttggcgaaactattagagcctata
tgtgaagctgatccttcagctttagctaattatgttgtcgctttggtgaagaaggacaag
cctgaaaaggatctcaaggcactctgtgctgatcagttggatgtctttctacagaaagaa
acaactggatttgtggacaagctttttgaatgtttaaccacaaaacattatttaggaaat
caagatcagtatgtaaaagaaacggcaaaggaagaagtaaaagcagtggatgtgaaaatg
gaacataatcgagatgagcctgtttctaattttgaagaggagcgtgacacaagaaggaaa
aaaagtcctttgagaaaccgccctgactttaatgaactacgcaatcgtgaagataaaaga
agagatgaacggaaacgcagagaaggtgacaggccacataagaatgccgacatttacaga
gagaggtatgatcgacgcagaggttccagcaggagtagaagtcggagccgcagtggcagc
cgagggaagacactggacaaagatcataaccgcatcaaagatcacagattaaagtttgag
atggatcgaagagaaccggagggatatgtcccttcatctgtgccaacttgcatccctgta
cagcatcagtattcctctggaggtcatgccatccctagtgcagttacagttgtagcacct
gctcatctccctgacagtaccactgagagctggtctaattacttctccaatcacagtgac
tcaaaaccatttcacagaaacatcccccagaagcgccgctgtagagactatgatgaaaaa
gggttttgtgtacgaggtgacctgtgtctttacgaccatggtaatgatcctttgatagtg
gatgatgtcacattgccaaccatgattcctttcccacctccacctggcattccacctcca
cgtcttccagttccccctatgccagtaccaccaccaaacctaaggctaccacttccacat
cctcctcctcctcctcctcctcctcctcctcctcatgggcagcctccgcctccagggatg
ttcccaatgccagataactatgatccagaagcgtataaccctgaagctccagggattaca
gctaccagcagaccaccttatcgacagtttattcccagaatacagacccagcgatccaat
ctaattggactgacatctagtgatatggatacaccaggttcaagagctgctaatattgtt
atccagactgaaccaaatgcttcttctgtgacaaataataatttaccaagatacaattct
gaccaagacagtaataggaagcgagctctatccagtggtgatggtccgccttcaaagaaa
ccttggatagaaaaacaaaattttaacaaccagcataagccgggatttcagaaaaaaaat
cattatgccaacaccagactggaggttcgcaaaattcccagggatctgaacaacattgct
aaactgaatgagcactttagcaagtttggcactattgttaatattcaggttgtttttggt
ggggacccagaagctgcgatgatccaatacacgacaaatgaagaagccagaagggcaatc
tctagtacagaagccgtgttaaacaacagatttattcgagtatattggcatagagacaat
aatgaacagtcgcaacaaacgcagcaaaatcaaacccaggtttcacctgttatacctcaa
catacaaatgtacacaaggtagtaaacaagccacacaatcctgggtcatatatcctaaat
aaagtgtcagcaaaacatcgcattggggctgcagtgttaaataaagcagaggcattacgt
actacagatgctgtggaggttgttaattctgctccaagtccactaaaagcacctttcact
tctgcttcagtaaaagtaatcccaaaaccaatagtaaaatcttcttctaaagtgcttgaa
gtccaggatgccctaaagaagaaacagcaggatactattaaacttcagcaagatatgagg
aaaaaacaacaagaaatgctggaaaaacaaatagaatgccagaaggtactaattaacaga
cttgagaaaaataaaaatatgaaaccggaggagagggcaaatataatgaaaacacttaag
gagcttacaaacaagatttcacaacttaaggatgaattaaaacccatatcaaatgctcca
ggaaagtccattcagccaaaaacaaagattgatgctcaaaaggagttacttgatgccgaa
ctggattttcataagaagctaagttctggagaagatacaacagacttgaaaaggaagctt
aatcagcttcagattgaggctgccagattaggtcttattcctggtgggagaggaaagatt
gcccaaggcagagggagaggaagaggccgtggtcgaagtagccgaggcagaggtgttgca
aaccacatggttgtggatcatcggcctcgagctttggcagtgttgggtgtcacaaaagaa
gaaaaagatgagttaatgccacactttactaaatttggagaggttgaagatctccatgat
catgaccctacaggcatggtggtgacatttaggaccagaagtgaagcagagaatgctgca
aaccaaggagcaaaattcaaaggacgtaccctgcaaatatcatggtataagcccaagact
ccatcagtttccactgaaccagaagaggaggagacaaaagaggaggacacagaacgagca
cttttgttgcctgaagaggaagaagaggatgatgaagacgaagatgaagaaaaatctcgt
tcatggagaagatga
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