Pseudovibrio sp. FO-BEG1: PSE_0288
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Entry
PSE_0288 CDS
T01669
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf02024
Quorum sensing
psf03060
Protein export
psf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSE_0288 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSE_0288 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSE_0288 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psf02044
]
PSE_0288 (ffh)
Enzymes [BR:
psf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PSE_0288 (ffh)
Secretion system [BR:
psf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSE_0288 (ffh)
Eukaryotic Sec-SRP protein
PSE_0288 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_30
AAA_33
VirC1
ABC_tran
TctA
APS_kinase
6PF2K
Thymidylate_kin
AAA_16
AAA_31
AAA_19
ArsA_ATPase
AAA_22
AAA_14
AAA_18
YqeC
Motif
Other DBs
NCBI-ProteinID:
AEV34800
UniProt:
G8PJ94
LinkDB
All DBs
Position
complement(281428..282984)
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AA seq
518 aa
AA seq
DB search
MFDNLSDRLGGILDKLTKRGALSESDVSEALREVRRALIEADVALPIVRSFVDKVKHRAV
GAEVVKSIKPGQMVVKIVHDQLVEMLGEESHPIDLNAPAPVCIMMVGLQGAGKTTATGKI
ARRLTQRDKRKVLMASLDTRRPAAQEQLKVLGEQNEIDTLPIIEGQQPVDIAKRALNAAK
LGGYDVVMLDTAGRGHIDEPLMVEMEQIKAASNPHEVLLVADALTGQDAVNLAKSFDERC
SITGIMLTRMDGDGRGGAALSMRAVTGKPIKLIGTGEKSDALEDFHPKRIADRILGMGDI
VSLVEKAAEAIDAEKAAEMARKMQKGHFDLNDLSEQLKQMEKMGGMSGMMGMLPGVGKMK
KQLAAANLDENMFKRQMAIISSMTAQERAKPDLLKASRKKRIAAGSGVQVAEVNKLLKMH
RQMADMMKAMGKGKGKGMLGKMMGAMGGGMPGMGGGMPNIDPKALEQMAKSGQLPGGMEL
PKGLPGGGLPGGLPGAGGPKLPGLGGAPGLPGLGKGKK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataatctgtcagatcgcctaggcggtattctagataagctcacaaaacgtggt
gcgctttctgaatccgatgttagtgaagcgctgcgcgaagttcgccgcgcgctcatcgag
gctgatgtggcgctgccgatcgtgcgttcttttgtcgacaaggtgaagcaccgcgctgtt
ggtgctgaggttgttaagtccattaagccgggtcagatggtcgttaagatcgtacatgac
cagttggtggaaatgctgggtgaggaatctcatccgatcgacctgaatgcaccggctccg
gtttgcatcatgatggttggtctgcagggggcaggtaaaaccaccgcaaccggcaagatt
gcacgtcgtctgacacagcgcgacaagcgcaaggttttgatggcttctcttgatacgcgc
cgtccggcagcgcaggagcagctgaaagttctgggtgaacagaacgaaattgacacactt
cctatcattgaaggacagcagccagttgatatcgccaagcgcgcgctgaacgcagcgaag
cttggtggttatgacgttgtcatgctcgataccgcaggtcgcggccacattgatgagcct
cttatggtggagatggagcagatcaaagctgcgtccaacccgcatgaagttctgcttgtt
gccgatgctctgactggccaggacgctgttaatctggcgaagagctttgatgagcgttgc
tccatcacaggtatcatgctgacccgtatggatggtgatggtcgcggtggtgcggctctt
tccatgcgtgctgtgaccggcaagccgatcaagctgattggtaccggtgaaaaatctgac
gctcttgaagacttccatccaaagcgtattgctgatcgcatcctcggcatgggtgacatt
gtctcccttgttgaaaaggctgctgaagcgattgatgcggaaaaagccgcagagatggct
cggaagatgcagaagggtcactttgacctgaacgatctttctgaacagctgaagcagatg
gaaaagatgggcggaatgtccggcatgatgggcatgcttccgggtgttggcaaaatgaag
aagcagcttgctgcggccaaccttgatgagaacatgttcaagcgccagatggcgatcatc
tcttccatgactgcgcaggaacgtgcgaagccggatcttctgaaagcaagccgtaagaag
cgtattgctgcaggttctggtgtacaggttgctgaagttaataagcttttgaaaatgcac
cgccagatggccgacatgatgaaggccatgggtaagggcaaaggcaagggtatgcttggc
aagatgatgggcgccatgggtggcggcatgccaggcatgggcggcggaatgccgaacatt
gaccctaaagcgctggagcagatggctaagtctggtcagctgccaggcggcatggaactg
cctaaaggattaccgggtggtgggcttcccgggggattgccaggtgctggcggccctaaa
ttgcccggtcttggtggagcgcctggtttgccagggcttggcaaggggaaaaagtaa
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