Pseudomonas shahriarae: HU773_015200
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Entry
HU773_015200 CDS
T07642
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_015200 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshh02044
]
HU773_015200 (tssK)
Secretion system [BR:
pshh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU773_015200 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXH87046
LinkDB
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Position
complement(3433198..3434529)
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AA seq
443 aa
AA seq
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MLLDKVTWQEGMLLRPQHLQHNDRYYHQQLARRSQLSQGYAWGFLTLEIDPQYLEMGKVV
VSQASGVLPDGTLFDMRDLSAPLVLEIPPNSGSQAVYLALPMVAGNAVEVRRPAQADVVA
RYTAYEVEVGDANAGEDTRCAITCARPDFRLLLGDDHDVQTYVRLKVAQVLDCNGQGVVA
LDSLFSPTFMHLHGSPFLLSCLKEVVSLLAFRGDAIAERLQDAGQAAGAEMGDFLMLQLI
NRTELILRHYLDQTRLGPDVLYQALLALLGELSTFSSATKRAGFDGRYQHSEQGPCFREL
MAAIRAVLSMVLEQHAIELVLQPRQYGVLVCPVNDLNLLGAATFIVAASARSDSEVLRQR
LPAHLKIGPVERIRELVNLHLAGISVKPLPVAPRQIPFHAEKTYFMLELSPRDLEQLAHS
GGFAFHVSGEFADLELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgataaagtcacctggcaggagggcatgttgttgcgccctcagcatctgcag
cacaacgaccgttactaccaccagcaactggcccgccgcagccagttgtcacagggctat
gcctggggcttcctgaccctggaaatcgacccgcagtatctcgagatgggcaaggtggtg
gtcagccaggccagtggcgtgctgcctgatgggacgctgttcgatatgcgtgacctgagc
gcgccgctggtgctggaaattcctccaaacagcggcagccaggcggtgtacctggcgttg
ccgatggttgccggcaatgccgtcgaggttcgccgcccggcgcaagctgatgtagtggcg
cgctacaccgcttacgaagtggaagtgggagacgccaatgccggcgaagacacacgctgc
gccataacctgcgcccgcccggattttcgcctgctgcttggcgacgaccatgacgtccag
acctacgtcaggctcaaagtcgcacaggtcctggactgtaacggccagggcgttgtagcc
ctcgacagcctgttctcgccgacgttcatgcaccttcatgggtcgccctttttactgtcc
tgcctcaaggaggtggtcagcctgttggcgttccgcggggacgcgattgccgagcgtttg
caggacgctggccaggcggccggggccgagatgggggacttcctgatgttgcagttgatc
aaccgtacggagttgatcctgcgccactatctggaccagacccgcttgggccccgacgtg
ttgtaccaggctctactggcgttgctgggggagctttcgacgttttccagcgctaccaaa
cgcgccggttttgatgggcgctaccaacatagcgagcagggaccgtgcttccgtgagctg
atggcggcaattcgtgcggtgttgtcgatggtactcgagcaacacgccattgagctggtg
ctgcagccccgtcaatacggggtgttggtgtgcccggtcaacgacctgaacctgctgggc
gctgcgaccttcattgtggccgccagtgcccgcagcgattcggaggtgttgcgccagcgg
ttgccagcgcacctgaaaatcgggccggtggagcggatccgcgagctggtcaacctgcac
ctggctggcattagcgtcaagccgttgcctgtggcgccccggcagattcctttccatgcc
gaaaaaacctatttcatgctcgaactcagcccccgcgacctggagcagttggcacattca
ggtggattcgccttccatgtcagcggcgagtttgccgatcttgaattgaaattctgggct
atcaggaactga
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