Plesiomonas shigelloides: SAMEA2665130_2180
Help
Entry
SAMEA2665130_2180 CDS
T04378
Symbol
cph2_3
Name
(GenBank) Bacteriophytochrome cph2
Organism
pshi
Plesiomonas shigelloides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
dCache_1
GGDEF
Motif
Other DBs
NCBI-ProteinID:
SBT61676
LinkDB
All DBs
Position
1:2403652..2406255
Genome browser
AA seq
867 aa
AA seq
DB search
MSLSAKLSGRLSLKLVVTILFLTAISAIFGVSMIIQYRNETAMIEDLSERIASTWAQLVR
NDLNNYLSAPPQANAVIAISLKSAPHINTQNLTEITPHLYDTISRVFTNVPQLSFVAIGT
TDGNYAGVSREIVKNKYTLTLKDSTTGGALMFYTDMEPTSAVLNKFDIYDPRVRPWYRDS
DTRKISLWTKAYQDYDANRGVTISYSTPAYDKDNRYIGIITSDIKLNGFNRFLRNVAGLG
NSVILILNEENQIISHSTDELTEHKSNIIDFSSMEDPKLLRPEQSQNPLVRVAAPLMSVS
DNQSHSFTLNGETYFIRMMSVGNELNLKNWKVAVIVAEKDLIGSLHEDRRTTIIWILCIF
ASGVILTWFALSKVTTPILSVAHAARLLTRQQWLPVKQDQFELKEIRLLNTAFNDMSRSL
SDAFHELEYSIEYDANTALMNRTGFKKWLNNQYADDSHTAPSLSGLVLVNINNTDVIKNS
LGDDSLNELYRLISARLQQYIIELDLSVIAVKSADHEFMLAYLTPHEYDYHKLIHVFYES
FKLHNDDVLITVNLGYLNRPFAAAKLQEAYTQASIALSAARKQGENTGVAYDKTLDANVG
LSTQILTHLNYALEQDELYLHYQPIIALDSERIIGAEVLIRWQSPILGFVSPAQFIPIAE
KSGLILPLGSWVLQQACHAVAHKIREQHWPANFELHVNLSVRQLMQADFVQRVTQCLHDA
GLPATNLTLEITESMLIENLSFIDERLRELRQHGIRIAIDDFGTGYSSLSHLYKLSFDCL
KVDRIFVSGLLDSQNCAAVLNSVVQLAHGFSVPMVAEGVEKREEAELLRKMGAQKAQGYY
FSRPVPLEQWAIDDTTGQHRLYILPNS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtctgcaaagctgtctggccgcttatcattaaaacttgttgtcaccatttta
tttctgacagcgatcagtgcgatttttggtgtatcgatgatcatccaatatcgtaatgaa
accgcgatgatcgaagatttaagcgagcgtattgcgtcaacgtgggcacaattggtacga
aatgatctgaataattacctgagcgcaccgccacaagccaatgcggttattgccatcagc
ttaaaatcagcaccgcatatcaatacacaaaacctgaccgaaataacgccacacctttac
gacacaattagtcgcgtatttaccaatgttccacagttaagttttgtcgccatcggcacc
actgacggtaactatgccggcgtcagccgtgaaattgtgaagaataaatataccctgacc
ttaaaagacagcaccaccggcggggcattaatgttctacaccgatatggagccaacctct
gcggtcttgaacaaatttgatatttacgatccacgcgttcgcccttggtatcgcgactcc
gatacccgcaaaatctcgctgtggacgaaagcctatcaagattatgatgccaatcgcgga
gtgactatctcctattccacgcccgcctacgataaagataatcgttatatcggtattatc
acgtctgatattaaattgaatggatttaaccgtttcttgcgcaacgtggccggacttggt
aattcagtgatcctgattttaaatgaagaaaatcagattatttcccattccaccgatgag
ctcaccgagcataaaagcaacattattgattttagttcgatggaagatccaaaactatta
cgcccagaacaaagtcaaaatcccttagtgcgtgtcgcagcaccgctcatgtccgtgtcc
gacaatcaatcccactcattcacgcttaacggtgaaacgtatttcatccgcatgatgagt
gtcggtaatgaactgaatctgaaaaattggaaagttgccgttatcgtcgcggaaaaagat
ttgattggtagcctgcatgaagatcgccgtactacgattatttggatcctgtgcatcttt
gctagcggcgtgattttaacttggtttgcattatcaaaagtcaccacaccaatcttgagt
gtggcccacgctgcgcgtctgttaacgcgccaacagtggttaccggtcaaacaagatcag
tttgagctgaaagaaattcgcctgcttaacacggcctttaatgacatgtcgcgctcgcta
tccgatgcattccatgagttggaatatagcatcgagtatgacgccaataccgcgttgatg
aaccgcaccggctttaaaaaatggctgaataaccagtacgccgacgatagccacactgcg
ccatcactatccggactggtgctggtcaacatcaacaacaccgatgtgatcaaaaacagt
cttggcgatgacagcctcaatgagctgtatcgtctgatcagcgcgcgcttacagcaatac
atcatagaactggatctgagtgtaattgccgttaaaagtgctgatcatgaatttatgctg
gcgtatctcacgccgcatgaatatgactaccacaaactgatccacgtgttttacgaatcg
ttcaaactgcacaacgatgatgtcttaatcacggtgaatctgggttatctcaatcgcccc
tttgctgcagcgaaattgcaagaggcctacacccaggccagcattgccctgtcagcggcg
cgcaagcaaggggaaaacaccggcgttgcctacgacaaaacgctggatgccaatgtcggg
ctctcaacccaaattctgacccacctcaattatgcactcgagcaagatgagctctacctg
cattatcagccgattattgcccttgatagtgagcgcattattggcgctgaagtgctgatc
cgctggcaatcgccgatcttgggctttgtcagtccggcgcagtttatcccgattgcagaa
aaatccggcttgatcctgccgctcggctcatgggtgttgcagcaagcttgccacgccgtg
gcgcataagatccgtgagcaacactggccagccaatttcgagttgcacgttaatctgtcg
gtacggcaactgatgcaagcggacttcgtccaacgggtgactcaatgtctgcacgatgcc
ggcctacccgcgacaaacttgacgctcgaaatcaccgagtccatgttgattgaaaacttg
agctttatcgatgagcggttacgtgaactgcgccaacacgggatccgtatcgccatcgat
gacttcggtaccggctactcgagtctgtctcacctgtacaaactgagctttgattgcctg
aaagtcgaccgcattttcgtcagtggcctactcgatagccaaaactgcgccgcagtgctt
aattcggtggtgcagctggcgcacggttttagtgtcccgatggtggccgaaggggtagaa
aagcgcgaagaagctgagttactgcgtaaaatgggcgcacaaaaagcgcagggctactat
ttcagtcgcccagttcctctggaacaatgggctatcgatgatacgacaggacaacaccgg
ctatacatcctgccgaatagctaa
DBGET
integrated database retrieval system
