Providencia stuartii MRSN 2154: S70_12190
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Entry
S70_12190 CDS
T02042
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psi
Providencia stuartii MRSN 2154
Pathway
psi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S70_12190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psi03019
]
S70_12190
03016 Transfer RNA biogenesis [BR:
psi03016
]
S70_12190
Enzymes [BR:
psi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
S70_12190
Messenger RNA biogenesis [BR:
psi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
S70_12190
Transfer RNA biogenesis [BR:
psi03016
]
Prokaryotic type
tRNA degradation factors
S70_12190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
aRib
SLS1_KH2
DUF2240
Motif
Other DBs
NCBI-ProteinID:
AFH94285
UniProt:
A0A140NMF2
LinkDB
All DBs
Position
2618289..2620412
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AA seq
707 aa
AA seq
DB search
MLNPIVRKFQYGQHTVSIETGMIARQATAAVMVNMDDTAVFVTAVAQKKVKEGQDFFPLT
VNYQERSYAAGRIPGSFFRREGRPGEGETLIARLIDRPLRPLFPEGFLNEIQIIATVVSV
NPQVNPDIVAMIGASAALALSGVPFNGPIGAARVGFINDQYVLNPTADELKLSRLDLVVA
GTESAVLMVESEADLLSEEQMLGAVVFGHDQQQIVIQEINELVKEAGKEKWDWQPEPVNQ
ALRDKVAALAESRMGDAYRITEKQERYEQVDLIKEEVTAAIVAEDENVDVAEVADILANL
EKQVVRSRVIRGEPRIDGREKDMVRALDVRTSVLPRTHGSALFTRGETQALVTATLGTER
DAQVIDQLMGEYTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVMAVMPDHAD
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDDFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITREIMQVALNQAKGARLHILGTMEQA
INSPRDDISEFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEVEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEIDRQGRIRLSMKEAVATEETPAQQQDSAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatcctatcgtacgcaaatttcaatacggtcaacataccgtatccattgaaacc
ggcatgatagcgcgtcaagcgactgccgctgttatggtaaacatggatgatacagccgtt
ttcgtgaccgcggttgctcagaaaaaagttaaagaaggccaagacttcttccctctgacc
gttaactaccaagagcgctcttatgctgctggtcgtattccaggcagtttcttccgtcgt
gaaggccgccctggtgaaggtgaaacgctgatcgcgcgtcttattgaccgcccattacgc
cctctgttcccagaaggtttcctgaacgaaatccaaatcatcgcaactgttgtttctgtt
aacccacaagttaacccggatattgttgctatgatcggtgcatcggctgcattggcgttg
tctggtgttccttttaatggcccaattggtgcggcacgtgttggttttatcaatgaccaa
tatgttctgaacccaacagcagatgagctaaaattaagccgccttgatttagtggtagca
ggaacagaaagcgcagttctgatggttgagtcagaagcggatctgttaagcgaagagcaa
atgctgggtgccgttgtttttggtcatgatcaacaacaaatcgtgattcaagaaatcaat
gagttagttaaagaagcaggtaaagaaaaatgggattggcaaccagagccagttaaccaa
gctttacgtgataaagttgcagcgctggctgaaagccgtatgggtgatgcttatcgtatc
actgaaaaacaagagcgttatgagcaagttgacctgatcaaagaagaagtcacagcagca
atcgtggctgaagatgaaaatgtcgacgtagctgaagttgctgacattctagcgaaccta
gaaaaacaagttgttcgtagccgtgtcattcgtggtgagccacgtattgatggtcgtgaa
aaagacatggttcgtgcgctggatgtacgcactagcgttctgccacgtactcacggttct
gcgctatttacccgtggtgaaactcaggcattagtcactgcaacactgggtactgaacgt
gatgcacaggttattgaccagttaatgggcgaatatactgaccgcttcttgttccactat
aacttccctccatactctgttggtgaaacaggtatggttggttcgcctaagcgtcgtgaa
attggtcatggtcgtttagcgaaacgcggtgtgatggcggtcatgcctgatcatgctgat
ttcccatacactgttcgtgttgtatctgaaatcactgaatcaaacggttcatcatcaatg
gcgtcggtttgtggtgcttctttagcactgatggatgcaggtgtaccaattaaagcagcg
gttgcaggtattgctatgggtctggttaaagaaggcgatgatttcgtcgtactttctgac
atccttggtgatgaagaccatttaggcgatatggactttaaagtcgcaggtagccgtgat
ggtatcagcgcactgcaaatggatattaaaatcgaaggtattactcgcgaaatcatgcaa
gttgcattgaaccaagcaaaaggtgctcgtctgcacatcctaggtacaatggaacaagcg
attaacagccctcgtgatgatatttctgaatttgcaccacgtattcacactatccgcatt
aatccagataagattaaagatgttatcggtaaaggtggttcggttatccgtgcgctgaca
gaagaaactggcactacaatcgaaattgaagatgatggtacagtgaaaattgctgcaact
gatggcttgaaagcaaaagaagctatccgtcgtatcgaagaaattactgctgaagtcgaa
gtcggccgtgtttaccaaggtaaagttactcgtatcgttgactttggtgcgttcgttgct
atcggtggtggtaaagaaggcttagtgcatatttctcaaatcgccgataagcgtgttgag
aaagtgactgactatctgcaaatgggtcaagaagttcctgttaaggtgttggaaatcgac
cgtcaaggccgcatccgcctgagcatgaaagaagctgttgcgactgaagaaactccagca
cagcagcaggactcagcagaatag
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