Pseudomonas siliginis: NF676_05950
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Entry
NF676_05950 CDS
T08569
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00300
Lysine biosynthesis
psii01100
Metabolic pathways
psii01120
Microbial metabolism in diverse environments
psii01230
Biosynthesis of amino acids
Module
psii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NF676_05950 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psii01002
]
NF676_05950 (dapE)
Enzymes [BR:
psii01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NF676_05950 (dapE)
Peptidases and inhibitors [BR:
psii01002
]
Metallo peptidases
Family M20
NF676_05950 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
UST80864
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Position
complement(1253456..1254607)
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AA seq
383 aa
AA seq
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MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGNAGFALEPMRIEDVDNFWATH
GNNDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVADYPNHKGKVAFLITSDEEGPAHHGTKAVVERLVARNERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVKGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVSSSIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctatcgccgacccttcaactggccatcgacctgatccgccgt
ccttccgtgaccccggtcgatgccgactgccagaagcagatgatgcagcgcctgggcaat
gccggtttcgccctggagccgatgcgcatcgaagatgtggataacttctgggccactcac
ggcaacaacgacggcccggtgctgtgcttcgccggtcacaccgacgtggtgccgaccggt
ccggttaccgcatggcagatcgatccgttcaatgccgtgatcgacgaacatggcatgctt
tgcggtcgtggcgcggcagacatgaaaggcagcctggcatcgatgaccgtcgccgctgaa
cgcttcgtcgccgactatccgaatcacaagggcaaggtcgctttcctgatcaccagcgac
gaagaaggcccggcgcatcacggcaccaaggctgtggtcgaacgtctggtcgcgcgcaac
gagcgtctggactggtgcatcgttggcgagccgtcgagcaccaccctggtcggcgatgtg
gtgaaaaacggtcgtcgcggttccctcggcgccaagctgacggtcaaaggcgtgcagggc
cacgtggcctacccgcatctggcgaagaaccctatccacctcgccgctccggcgctggca
gagctggccgccgagcactgggaccacggcaacgatttcttcccgccgaccagtttccag
atttccaacctcaattccggcaccggcgcgaccaacgtgatcccgggtgatctggtggcg
gtgttcaacttccgtttctccaccgaatcgaccgtagaaggcctgcagaagcgtgtggcc
gatattctcgacaagcatggtctggactggcacatcgactgggcactgtccggcctgccg
ttccttaccgaaccgggcgcgctgctcgatgcggtatcgtcgagcatcaaggacatcacc
ggtcgcgagaccaaggcgtcgaccagcggcggcacctccgatggccgtttcatcgcgacc
atgggcacacaagtggttgaacttggcccggtcaacgcgaccattcaccaggtcaacgag
cgcgtgctggcggcggatctcgatgtgctgacggaaatctattaccagaccctgatcaag
ttgctcgcctga
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