Pseudomonas siliginis: NF676_09360
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Entry
NF676_09360 CDS
T08569
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00071
Fatty acid degradation
psii00280
Valine, leucine and isoleucine degradation
psii00310
Lysine degradation
psii00362
Benzoate degradation
psii00380
Tryptophan metabolism
psii00410
beta-Alanine metabolism
psii00640
Propanoate metabolism
psii00650
Butanoate metabolism
psii00907
Pinene, camphor and geraniol degradation
psii00930
Caprolactam degradation
psii01100
Metabolic pathways
psii01110
Biosynthesis of secondary metabolites
psii01120
Microbial metabolism in diverse environments
psii01200
Carbon metabolism
psii01212
Fatty acid metabolism
Module
psii_M00087
beta-Oxidation
psii_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NF676_09360
00650 Butanoate metabolism
NF676_09360
09103 Lipid metabolism
00071 Fatty acid degradation
NF676_09360
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NF676_09360
00310 Lysine degradation
NF676_09360
00380 Tryptophan metabolism
NF676_09360
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NF676_09360
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NF676_09360
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NF676_09360
00930 Caprolactam degradation
NF676_09360
Enzymes [BR:
psii01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NF676_09360
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NF676_09360
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NF676_09360
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
UDPG_MGDP_dh_N
DUF1731
Sacchrp_dh_NADP
DUF1707
Motif
Other DBs
NCBI-ProteinID:
UST81510
LinkDB
All DBs
Position
1966452..1968596
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AA seq
714 aa
AA seq
DB search
MSEAIRYEKGQDAIVVLTMDMPGQSANTMNAVNREAMAACVARLSAEKDSIAGVIITSAK
KTFFAGGDLNELIKVGKPEAKAFYDMVLTLKAQLRSLETLGKPVVAAINGAALGGGWEIC
LACHHRIAVDDASVQLGLPEVTLGLLPGGGGVVRMVRMLGIEKALPYLLEGKKVRPQQAL
QAGLIDELAANRDELLAKARAWILANPAAVQRWDVKGYQIPGGTPSSPKVAQMLAIAPSI
LRAKTQGTLPAPEKILCAAVEGAQVDFDTAHLIETRYFTELTTGQISKNLIGTFWFQLNE
INAGGSRPQGFAPYKTRKVGVLGAGMMGAGIAFVSASAGIEVVLKDINLAAAEKGKAHSA
SLLDKKVARGQLTVEQREAVLARIVASESDADLAGCDLIIEAVFEDRQLKAKVSAAAQQV
VGGDAVIASNTSTLPITGLATAVPDQSKFIGLHFFSPVEKMPLVEIIKGAQTSDETLARG
FDFVLQIKKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGVSAPMIETEARKAGMPVGPL
AISDEVSLSLMSHIRQQTAKDLQAEGKPLIEHPAFAVIDLMLNEFKRPGKAAGGGFYEYP
AGAQKHLWPELKTRFEKADGQISAKDVRDRLLFVQAIETVRCVEEGVLTSTADANVGSIF
GIGFAAWTGGALQFINQYGLKDFIARAQYLAEQYGERFTPPALLLDKAAKGEMF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccattcgttacgaaaaaggccaggacgctatcgtcgtgctgaccatggac
atgccgggccagagcgccaacaccatgaacgccgtgaatcgcgaggccatggccgcttgc
gttgctcgtttgtcagcggagaaggacagcatcgccggagtgatcatcacctcggcgaag
aaaaccttttttgccggcggcgacctcaatgaattgatcaaggttggcaagcccgaagcc
aaagccttctacgacatggtgctgaccctcaaggcgcaattgcgcagcctggaaaccctc
ggcaaaccggtggtcgcggcgatcaacggcgctgcgttgggcggcggctgggagatctgt
ctggcctgccaccatcgcatcgctgtggatgatgcctcggtgcaactcggtttgccggag
gtgacgctgggcctgttgccgggcggcggcggggtggtgcgcatggtgcgcatgctcggt
atcgaaaaagccctgccgtacttgcttgaaggcaagaaggtgcgcccgcaacaggcgttg
caggccgggctgattgatgaactggcagcgaatcgcgatgagctgctggccaaggcgcgc
gcgtggattctcgccaatccggcggcagtgcagcgctgggacgtgaagggctaccagatt
cctggcggcacgccatcgagcccgaaagtggcgcagatgctggcgattgcgccgtcgatc
ctgcgcgcgaaaactcaaggcaccctgccggcgccggagaagattctatgcgcggcggtg
gagggcgctcaggtcgatttcgacaccgcgcacctgatcgaaacccgctacttcaccgag
ctgacgaccgggcagatttcgaaaaacctgatcggcacgttctggttccagttgaacgaa
atcaacgccggcggttccaggccgcaaggttttgcgccctataaaacccggaaagtcggt
gtgctcggcgccggaatgatgggcgcgggcatcgcgtttgtcagcgcttcggccggtatc
gaagtcgtcctcaaggacatcaatctcgctgctgccgagaaaggtaaggcgcattcagct
tcgctgctggataaaaaagttgcccgtggccagctgactgtcgagcagcgcgaggcggtg
ctggcgcgcatcgttgcgagcgaaagcgatgccgatctggccggttgcgatctgatcatc
gaagcggtgttcgaggatcgccagctcaaagccaaggtatctgccgccgcgcaacaggtg
gtgggtggcgacgctgtcatcgcctccaacacatcgaccctgccgatcaccggcctggcg
acggccgtgcccgatcaaagcaaattcatcggcctgcatttcttcagtccggtggaaaaa
atgccgctggtggaaatcatcaagggcgcgcagaccagcgacgaaactctcgctcgcggt
ttcgacttcgttctgcaaatcaagaaaactccgatcgtggtcaatgacagtcgcggcttc
tttacctcgcgggttttcggcacattcaccaacgagggcatcgccatgctcggcgagggt
gtcagtgcgccgatgatcgagaccgaagcgcgcaaggccgggatgccggtcgggccgctg
gccatctccgatgaagtttccctcagcctgatgagccatatccgtcagcagacggccaag
gacttgcaggcagaaggcaaaccgctgattgagcacccggccttcgccgtgattgacttg
atgctcaatgaattcaagcgaccgggcaaagctgccggaggcggtttttatgagtatcca
gcgggcgcgcagaagcatttgtggccggagctgaaaacgcgcttcgagaaggccgacgga
cagatctctgcgaaggatgtgcgtgatcggctgttgtttgtgcaggccatcgaaaccgtg
cgctgtgtggaggagggcgtgctgacctcgacggcggatgccaacgtcggttctatcttc
ggcatcggtttcgccgcgtggaccggcggggcgctgcagttcatcaaccagtatggcctg
aaggacttcatcgcccgcgcgcagtatctggccgagcaatacggcgaacgttttaccccg
ccagcgctgctgctggacaaagcggcgaaaggtgaaatgttctag
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