KEGG   Pseudorhodoplanes sinuspersici: CAK95_05645Help
Entry
CAK95_05645       CDS       T04834                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
psin  Pseudorhodoplanes sinuspersici
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:psin00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    CAK95_05645
   03410 Base excision repair
    CAK95_05645
   03420 Nucleotide excision repair
    CAK95_05645
   03430 Mismatch repair
    CAK95_05645
Enzymes [BR:psin01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CAK95_05645
    6.5.1.6  DNA ligase (ATP or NAD+)
     CAK95_05645
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CAK95_05645
DNA replication proteins [BR:psin03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CAK95_05645
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CAK95_05645
DNA repair and recombination proteins [BR:psin03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CAK95_05645
   NER (nucleotide excision repair)
    Other NER factors
     CAK95_05645
   MMR (mismatch exicision repair)
    Other MMR factors
     CAK95_05645
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1134051..1135721
Genome map
AA seq 556 aa AA seqDB search
MNRFAELLDRLAYEPGRNNKLRLMTDYFRHTPDPERGYALAALTGNLTFQYAKPGMIRGL
ITERADPVLFALSRDFVGDTSETIALMWPVPEARPNFIPSISDVVTTLNTLGKAQLPAQI
ARWLDALDETGRWALLKLVTGALRVGVSARLAKTAAAALGDKDVTEIELMWSGLEPPYTD
LFAWLEGRGDKPSTTDPAPFRPAMLAHAIEDTDFEKLDPANYMAEWKWDGIRVQASAGVN
EHGDRIVRMYSRTGEDISKGFPDLLDSLNFNGSLDGELLILRDNRVQSFNVLQQRLNRKA
VTPKLLLEYPAHLRAYDLLFDGSDDLRELPFEERRTRLQSFIARHAHPRLDLSPLVAFKT
WPELAAARADPASAGAGEDANAVEGIMLKRRDAPYMPGRPKGLWWKWKRDPLTVDAVLMY
AQRGSGKRSSYYSDYTFGVWSVIDGTDTLVPVGKAYFGFTDEELLKIDRYVRNNTVERFG
PVRAVKYGPDEGLVLEVAFEGLQRSTRHKSGLAMRFPRINRLRWDKPPREADRLENLEKM
LEGMEMGRSALQAAAP
NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt
atgaaccgcttcgccgaattgctcgaccgcctcgcctacgagcccggccgtaacaacaag
ctgcggctgatgacggactacttccgtcacacgcccgatcccgaacgcggctatgcgctc
gccgcgctcaccggcaatctcacattccagtatgccaagcccggcatgatccgcgggctg
atcaccgagcgcgccgatccggtgctgttcgcactctcgcgcgatttcgtcggcgatacg
tcggaaacgattgcgctgatgtggccggtgccggaggcgcgtccaaacttcattccgtcg
atcagcgacgtcgtgacgacactcaacacgctcggcaaggcgcagcttccggcgcagatc
gcgcgctggctcgacgctctcgacgagacaggacgctgggcgctgctcaagctggtcacc
ggcgcattgcgcgtcggcgtttccgcccgcctcgcaaagacggcggcggcggcacttggc
gacaaggacgtcaccgaaatcgaactgatgtggtccggcctcgagccgccgtataccgat
ctcttcgcctggctcgagggccgcggcgataaaccgtcgaccaccgatccggcgccgttc
cgaccggcgatgctggcgcatgcgatcgaagacaccgatttcgaaaagcttgatcccgcg
aactacatggccgagtggaaatgggacggcatccgcgttcaggcttctgccggcgtcaac
gaacacggcgaccgtatcgtgcgcatgtattcgcgcaccggcgaagacatctcgaaaggc
tttcctgatcttctggactcgctgaacttcaacggctcgctcgatggcgaactcctgatc
ctgcgcgataaccgcgtgcaaagcttcaacgtcctgcagcagcgcctcaatcgcaaagcg
gtcacgccgaagctgctgctcgaatatcccgcgcatctgcgtgcctacgatcttctgttc
gatggcagcgacgatctgcgcgaattgccgttcgaggagcggcgcacgcgcctgcaatcc
ttcatcgcccgccacgcgcatccgcggctcgatctttcgccgctcgtcgcattcaagacc
tggccggagctcgccgcagcacgggccgatccggcatcagccggcgccggcgaggacgcc
aatgccgtcgaaggcatcatgctcaagcgcagggatgcgccctatatgcccggccgtccg
aaaggactctggtggaaatggaagcgcgacccgctgaccgtcgatgccgtgctgatgtat
gcgcagcgcggcagcggcaagcgctcgtcctattattccgactacaccttcggcgtctgg
agcgtgatcgacggcaccgacacactggtgccggtcggcaaagcctatttcggcttcacc
gacgaggaattgctgaagatcgatagatatgtccggaacaataccgtggagcgtttcggc
ccggtacgcgctgtcaaatatggcccggacgaaggcctggtgctggaagtggcgttcgag
ggcctgcagcgctccacgcgccacaaatccggcctcgccatgcgttttccacggatcaac
cggctgcgctgggacaagccgccgcgggaagccgaccgtctcgaaaaccttgaaaagatg
ctagaaggaatggagatgggccgcagcgccttgcaggcggctgcgccatga

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