Phocoena sinus (vaquita): 116739816
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Entry
116739816 CDS
T07759
Symbol
ASXL1
Name
(RefSeq) polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116739816 (ASXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116739816 (ASXL1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116739816 (ASXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
116739816
NCBI-ProteinID:
XP_032460434
Ensembl:
ENSPSNG00000005728
LinkDB
All DBs
Position
15:complement(26304337..26372939)
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AA seq
1545 aa
AA seq
DB search
MKDKQKRKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRSGTSPLACLNAML
HSNSRGGEGLFYKLPGRISLFTLKKDALQWSRSPAAVEGEEPEDTADVESCGSNEASTVS
GENDVSLDETSSNASCSTESQSRPHSNPRDSYRASSQANKQKKKTGVMLPRVVLTPLKVN
GAHVEPASGFSGRHADGESGSPSSSSSGSLALGSAAIRGQAEVTRDPAPLLRGFRKPATG
QMKRNRGEEIDFETPGSILVNTNLRALINSRTFHALPSHFQQQLLFLLPEVDRQVGTDGL
LRLSSSALNNEFFTHAAQSWRERLADGEFTHEMQVRIRQEMEKEKKVEQWKEKFFEDYYG
QKLGLSKEESLQQNVGQEEVEIKSDLRVSGESTRPQRGPATRQRDGHFKKRSRPDLRTRA
RRNLYKKQEPEQAEVAKDTQSVAPDMPLYKDGEAKTDAAGVGGPHLPGTSSAAPNPESSE
FQVETVASRIQPDPDDLAHVSTSPDRIPSLPQETVDQEPKDQKRKSFEQAASASFPEKKP
RLEDRQSFRNTIESVHAEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIVPI
TESSCRGWTGTRTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGG
RGIGSGDGGEACGHPEPRGAPGTPGECASDLQRTQLLPPCPLNGEHVHPGTAVSRARRED
LASPRKEKSYPRQRVPDGLRSGLEDASRLPIAPTGDQPCQALPPLPSKTPAPERLVEQPA
LHLGGRTECGSGTTSWERGNEERGPTIPLESSPVQALAGDVGLEEGTGQALDSDSNPTVK
DPVNVTPSPIPEPSLAGSLQDRPFDDESGLGDSGPPMRESATRRENLKTEAPVSAGAAPW
MPGLSNDEAAGRPEPDSREDVPSVTPQVGEEWEKAAPLVPASPGGLTAEEGLDPPDSLAS
LWTVPSPGCAASTGHDRRQLEGGKLKISGDSEVLSPQSESTDTASDFEGRFSEDSIEAEP
SEAAVPKRASAVEQGEKHVWNRSTSLSKVNDDLSLVTRTDGMVAPQSWVSRVCAVPQKIP
DSLLLASTEYQPRPVSLGRLASSVEATNPLVMQLLQGSLPLEKVLRPAHGGSKPESPRLP
LTTEQSHDGSLYIGSLQDPAESSREVGSSSPSSLRASKESLLPESREASTGLARLEAAQA
PGAPPKISKHALSLGSLYPVTNPVAASGKVEVDSKEQFSPFSFEDQKEAGDLSQCSNSSA
APGTSPGNLTTSRAPCFSSPIVVSSGPDQAGQALGDQNSAGGQGKKLFGSKNEAAALQCP
RPVEPMPLPADAPPDFPSRKSGPSKNSVSGGVQTAREDWAPEPPPASVGSIKSEKTFGGG
PLKANAENRNVAGPSPRELVDHLQGIPFVLDLPFWKLPREPGKGLSQPLEPSSIPSQLNI
KQAFYGKLSKLQLSSTSFNYSSGSPTFAKGLAGSVVQLSHKANFGASHSASLSLQMFTDS
STVESISLQCACSLKAMIMCQGCGAFCHDDCIGPSKLCVLCLVVR
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagaggaagaaggagcgcacgtgggcagaggccgcgcgcctggta
ctagaaaactactcagacgctccaatgacaccaaaacagattctgcaggtcatagaggca
gaaggactaaaggaaatgagaagtgggacatcccctcttgcatgtcttaatgccatgcta
cattccaattcaagaggaggagaggggttattttataaactacctggccgaatcagcctt
tttacactcaagaaggatgccctgcagtggtctcgcagtccggctgcagtggagggagag
gagccagaggacacagctgatgtggagagctgtgggtctaatgaagccagcactgtgagt
ggtgaaaatgatgtttctctcgatgaaacatcttctaatgcttcctgttctaccgaatct
cagagtcggcctcattccaatcccagggacagctacagagcttcctcacaggcgaacaag
cagaagaagaagaccggggtgatgctgcctcgagttgtcctgactcctctgaaggtaaac
ggggcccacgtggaacctgcatcagggttctcaggccgccacgccgatggcgagagcggc
agcccgtccagcagcagcagtggctctctggccctgggcagcgctgctattcgtggccag
gccgaggtcacccgggaccctgccccgctcctgagaggcttccggaagccggccacaggt
caaatgaagcgcaacagaggggaagagatagattttgagacgcctgggtccattctcgtc
aacaccaacctccgggccctcatcaactctcggaccttccatgccctgccgtcccacttc
cagcagcagctcctcttcctcctgcctgaagtggacagacaggtggggaccgatggcctg
ttgcgtctcagcagcagtgcactgaacaacgagtttttcacccacgcggctcagagctgg
cgggaacgcctggctgatggcgaattcactcatgagatgcaagtcaggatacgacaggaa
atggagaaggaaaagaaggtggaacaatggaaagaaaagttcttcgaagactactatgga
cagaagttgggtttaagcaaagaagagtcattgcagcagaatgtgggccaggaggaggtt
gaaatcaagagtgacttgcgtgtctcgggagaatcaacacgaccgcagcgtggcccggcc
acccggcagcgagatgggcatttcaagaaacgctctcggccagatctccgaaccagagcc
cgaaggaatctgtacaaaaaacaggagccagaacaagcagaggttgctaaagacacacag
tctgtggcaccagacatgcccctgtacaaggatggggaggctaagaccgatgcagcaggg
gtgggcggtccccacctgcctggcacatcttccgcagcacccaacccagagagttccgaa
ttccaggtggaaactgtggcttcccggatccagcccgatccagacgacctggcacatgtc
tccacgtctccagacagaattcccagcttgcctcaggagaccgtggatcaggaacccaag
gatcagaagaggaaatcctttgagcaggcggcctctgcatcctttcccgaaaagaagccc
cggcttgaagatcgtcagtcctttcgtaacacaattgaaagtgttcacgccgaaaagcca
cagcccaccaaagaggagcccaaagtcccgcccatccggattcaactttcacgtatcaaa
ccaccctgggtggttaaaggtcagcccacttaccagatatgcccccgcatcgtccccatc
acggagtcctcatgtcggggctggactggcaccaggacccttgcagacattaaagcccgt
gctctgcaggtccgaggggcgagaggccaccactgccatcgagaggcggccaccactgcc
atcggaggggggggtggcccgggtggaggtggcggcggggccaccgatgagggaggtggc
agaggcatcggcagtggtgatggtggtgaggcctgtggccaccctgagcccaggggagcc
ccaggtacccctggagagtgtgcgtcagatctacagcgaacacaactactgccgccttgt
cctctaaatggggagcatgtccatcctggaactgccgtgtccagagccaggagagaggac
ctggcttctcccagaaaggagaagagctacccacgacagagggttccagatggcctcaga
agcgggctggaagatgcttcccgacttcccattgctcccactggggaccagccatgccag
gccttacccccactgccctccaaaaccccggcacctgagcgattagttgagcagcctgcg
ttgcatctgggaggtagaactgaatgtgggtctggtaccacttcctgggaaaggggtaat
gaggagcgaggacccaccatccccctggagagcagtcctgttcaggctctagcgggggat
gttggattagaagaaggaaccggccaggctctagacagtgacagtaatcccaccgtgaag
gatcctgtgaatgtgacccccagtcccatccctgaaccatcgttggccggttccctgcag
gacagaccatttgatgatgaatcaggacttggtgactcgggcccacccatgagggaaagt
gctactagacgagaaaacttgaaaaccgaggctcccgtctccgctggtgctgctccttgg
atgcctggcctgtcaaatgacgaggcagcgggacggcctgaacccgactccagagaagac
gtcccatccgttacgccgcaggttggagaggagtgggagaaagctgctcccctcgttcca
gcgtcacctggggggttgacagctgaggagggtctggatccccccgacagcttggcttca
ctctggacagtgccatctccagggtgtgctgccagcaccggccacgaccgcaggcagctg
gaaggtggaaagctgaaaatcagtggggactctgaagtgctgagccctcagagcgagtcc
acagacacagcctctgactttgaaggccgcttctctgaggacagcattgaggccgagcct
agtgaagctgcggtgccgaagagggcctcagcggtggagcagggtgagaaacacgtttgg
aaccgctccacctcactctccaaggtgaacgatgacctgagtctggtcacaaggacagac
gggatggttgctccacagagctgggtgtctcgagtgtgtgcggttccccagaagatcccg
gactccctgttactggccagtaccgagtaccagccgaggcctgtgtccctgggcaggctc
gcgtcctcggtggaggctactaaccccctcgtgatgcagttgctgcagggcagcttgccc
ctagagaaggttcttcgtccagcccacggtggcagcaaacccgaatccccacgactccca
ctgacaacagagcagagccatgacggctccctgtatatcggatctttgcaagaccctgcg
gaaagcagtcgtgaggttggcagtagcagtcccagttctttaagagcttcgaaggagtct
cttctacctgagagccgtgaagcaagcaccggccttgccaggctggaggccgcccaggct
cctggagcgcccccaaagatttccaagcacgccctgagtttaggctccctatatccagtg
acaaatccagtggctgcctctgggaaagtagaagtggattccaaagagcagttctctccc
tttagctttgaagatcagaaggaagctggtgacctgtcccagtgcagtaattcaagtgcc
gccccaggcacgagtccgggaaatctcactacctcgagagccccttgtttctcatctcca
attgtggtctcctcgggtcccgatcaggcaggtcaggccctgggtgatcagaacagtgct
ggaggccaagggaagaagctctttggctccaaaaacgaggctgcagcccttcagtgcccc
cggcctgtggagccaatgcctctgcctgctgatgcccctcccgattttcccagcaggaag
tcggggccaagcaaaaactctgtgtctggtggggtacagacggccagggaagactgggct
ccagagccaccgcctgcctctgttggcagcatcaagagcgagaagacttttggtgggggg
cctctcaaggcgaatgcagagaacagaaatgtagcggggcctagtcctcgggagctggtg
gatcacttgcaagggatcccctttgtccttgatttgcccttctggaaattaccccgagag
cctgggaaagggctcagtcagcctctagagccttcttccatcccctcccagctcaacatc
aaacaggcattttatgggaagctttccaaactccagctaagttccaccagctttaattat
tcctctggctcccccacctttgccaaaggccttgccggaagtgtggtgcagctgagccac
aaagcaaactttggtgcaagccacagcgcatcactttccttgcagatgttcaccgacagc
agcacggtggaaagcatctcactccagtgtgcgtgcagcctgaaagccatgatcatgtgc
cagggctgtggtgcgttctgtcacgatgactgtattggaccctcaaagctctgtgtattg
tgccttgtggtgagataa
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